Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0989 ATGGTTGAGAAGGATGGCGTTGGCAGCAAGTATCTTCAACAAACACTTAACGTCTCCATCGACATGCATCAACACGGAATCTCTAAGTGTTTCGACGACGATGGTCGCCCGAAAAGAACCGGGACGGTGTGGACTTCAAGTGCACACATAATAACTGCAGTGATTGGGTCTGGGGTGCTATCTCTGGCTTGGGCTATAGCTCAGCTTGGATGGATTGCTGGTCCTATTGTCATGGTTATCTTTTCTGCCATCACTTACTACACTTCCACTCTTCTCGCTGATTGTTACCGCACCGGTGATCCTGTAACTGGCAAGAGAAACTACACTTACATGGACGCTATTCAGTCTAACTTTGGTGGAAATGGCTTTAAGGTCAAGCTGTGTGGGCTAGTTCAGTATGTTAACCTTTTCGGAGTGGCCATTGGTTACACTATAGCGGCTTCCACTAGCATGATGGCAATTGAAAGATCTAATTGTTTCCACAAGAGTGGAGGGAAAGATCCGTGCCACATTAACAGCAACATGTACATGATTTCATTTGGTATAGTGGAAATTCTTTTCTCACAAATTCCGGGCTTCGATCAACTGTGGTGGCTCTCCATTGTAGCTGCTGTCATGTCCTTCACATACTCCACTATTGGGCTAGGCCTTGGTATTGGGAAAGTTATTGAAAATGGAGGAGTTGGAGGAAGCCTAACCGGGATAACAATTGGTACCGTGACCCAAACTGATAAAGTTTGGAGAACCATGCAAGCTCTTGGTGACATAGCCTTTGCTTATTCATACTCCCTCATCCTTATAGAAATTCAGGACACAGTGAAATCCCCTCCATCAGAGTCAAAAACAATGAAGAAGGCTAGTTTCATCAGTGTTGCAGTAACTAGCATTTTCTACATGCTTTGTGGTTGCTTTGGTTATGCTGCTTTTGGAGATGCAAGCCCTGGAAACCTTCTCACTGGTTTTGGCTTCTACAACCCATACTGGCTCCTTGACATAGCTAATGCTGCCATAGTGATCCACCTTGTTGGTTCATACCAAGTTTACTGCCAGCCCCTCTTCGCCTTCGTCGAGAAACACGCGGCGCAAATGTTCCCAGATAGTGATTTTCTGAACAAAGAAATTGAAATTCCAATCCCTGGTTTCCATCCCTACAGGCTCAACCTCTTCAGGTTGGTTTGGAGGACAATATATGTAATGTTGAGCACTGTAATATCAATGCTCCTCCCATTCTTCAATGACATAGGTGGACTTCTTGGAGCATTTGGATTTTGGCCCCTTACAGTGTATTTCCCAGTGGAGATGTACATTATTCAAAAGAGAATACCAAAGTGGAGCACAAAGTGGATCTGCCTCCAAATACTTAGCATGACTTGCCTTTTGATGACTATAGGAGCTGCAGCTGGCTCTATTGCTGGGATTGCCATTGATCTTCGAACTTACAAGCCATTCAAGACCAACTATTGA 1464 0.4454 MVEKDGVGSKYLQQTLNVSIDMHQHGISKCFDDDGRPKRTGTVWTSSAHIITAVIGSGVLSLAWAIAQLGWIAGPIVMVIFSAITYYTSTLLADCYRTGDPVTGKRNYTYMDAIQSNFGGNGFKVKLCGLVQYVNLFGVAIGYTIAASTSMMAIERSNCFHKSGGKDPCHINSNMYMISFGIVEILFSQIPGFDQLWWLSIVAAVMSFTYSTIGLGLGIGKVIENGGVGGSLTGITIGTVTQTDKVWRTMQALGDIAFAYSYSLILIEIQDTVKSPPSESKTMKKASFISVAVTSIFYMLCGCFGYAAFGDASPGNLLTGFGFYNPYWLLDIANAAIVIHLVGSYQVYCQPLFAFVEKHAAQMFPDSDFLNKEIEIPIPGFHPYRLNLFRLVWRTIYVMLSTVISMLLPFFNDIGGLLGAFGFWPLTVYFPVEMYIIQKRIPKWSTKWICLQILSMTCLLMTIGAAAGSIAGIAIDLRTYKPFKTNY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0989 487 Pfam Transmembrane amino acid transporter protein 39 473 IPR013057 -
Gso6g0989 487 PANTHER OS05G0424000 PROTEIN-RELATED 11 481 - -
Gso6g0989 487 PANTHER AMINO ACID CARRIER 11 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0989 Gso-Chr6 9538315 9542505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0989 18 487 Organic Solute Cotransporters AT1G77380 75.532 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0989 K24917 - gmx:100792389 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1762 4 47737829 47744690 Gso6g0989 6 9538315 9542505 GST
Gso14g1212 14 28580652 28585261 Gso6g0989 6 9538315 9542505 PCT
Gso13g0160 13 10202345 10207211 Gso6g0989 6 9538315 9542505 PCT