Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1319 ATGGTTGAAAAATCTTCCAGAACCAATCTTAGCCACCATCAAGACTTTGGCATGGAGCCTTACTCCATTGATGGTGTTTCTTCACAAACTAACTCCAAATTCTACGATGATGATGGCCATGTTAAACGAACAGGGACCGTTTGGACAACAAGCTCGCACATAATAACAGCAGTGGTGGGTTCTGGGGTGCTGTCTTTGGCATGGGCCATGGCTCAAATGGGTTGGGTTGCTGGGCCTGCAGTTATGATCTTCTTCAGTGTTGTTACGTTGTATACGACGTCGCTTCTGGCTGATTGTTATCGCTGTGGTGACCCTGTTACCGGGAAGAGAAACTATACTTTCATGGATGCAGTTCAATCCATTCTCGGTGGGTATTATGATGCATTTTGTGGGGTAGTTCAGTACTCAAATCTTTACGGAACCGCCGTAGGATACACAATTGCAGCTTCTATTAGCATGATGGCAATAAAAAGGTCCAACTGTTTCCATTCTTCAGGCGGAAAAAGTCCATGTCAGGTTTCAAGCAACCCATACATGATCGGTTTTGGCATAATCCAAATTTTATTTTCTCAAATTCCAGATTTTCATGAAACATGGTGGCTCTCCATAGTTGCAGCAATCATGTCTTTTGTCTATTCCACAATTGGGCTCGCTCTTGGCATTGCCAAAGTTGCAGAAATGGGTACTTTCAAGGGTAGTCTCACAGGAGTAAGGATTGGAACTGTGACCGAGGCCACAAAAGTATGGGGGGTTTTCCAAGGTCTTGGTGACATAGCCTTCGCCTATTCATATTCTCAAATTCTCATTGAAATTCAGGACACCATAAAATCTCCACCATCGGAAGCAAAGACAATGAAGAAGTCTGCTAAGATAAGTATTGGAGTAACCACAACATTTTATATGCTTTGTGGTTTCATGGGCTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTGCTCACAGGATTTGGTTTTTTTAACCCATATTGGCTCATAGATATTGCTAATGCTGCTATCGTAATTCACCTTGTGGGAGCATACCAAGTTTATGCCCAGCCCCTCTTTGCCTTTGTCGAGAAATGGGCTTCAAAAAGATGGCCTGAAGTTGAGACGGAATATAAAATTCCAATTCCTGGTTTTTCACCCTACAATCTAAGCCCATTTAGATTAGTTTGGAGAACAGTGTTTGTTATCATAACCACTTTTGTAGCAATGTTGATTCCATTCTTCAATGACGTTTTGGGACTTCTTGGAGCACTGGGGTTTTGGCCTTTAAGTGTTTTTCTCCCAGTGCAGATGAGTATCAAACAAAAGAGGACCCCAAGGTGGAGTGGTAGATGGATTGGTATGCAAATCTTAAGTGTTGTTTGTTTCATAGTATCAGTTGCGGCTGCTGTTGGCTCAGTTGCCAGTATCGTGCTTGACCTACAGAAATACAAACCGTTTCATGTAGACTATTAA 1461 0.4264 MVEKSSRTNLSHHQDFGMEPYSIDGVSSQTNSKFYDDDGHVKRTGTVWTTSSHIITAVVGSGVLSLAWAMAQMGWVAGPAVMIFFSVVTLYTTSLLADCYRCGDPVTGKRNYTFMDAVQSILGGYYDAFCGVVQYSNLYGTAVGYTIAASISMMAIKRSNCFHSSGGKSPCQVSSNPYMIGFGIIQILFSQIPDFHETWWLSIVAAIMSFVYSTIGLALGIAKVAEMGTFKGSLTGVRIGTVTEATKVWGVFQGLGDIAFAYSYSQILIEIQDTIKSPPSEAKTMKKSAKISIGVTTTFYMLCGFMGYAAFGDSAPGNLLTGFGFFNPYWLIDIANAAIVIHLVGAYQVYAQPLFAFVEKWASKRWPEVETEYKIPIPGFSPYNLSPFRLVWRTVFVIITTFVAMLIPFFNDVLGLLGALGFWPLSVFLPVQMSIKQKRTPRWSGRWIGMQILSVVCFIVSVAAAVGSVASIVLDLQKYKPFHVDY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1319 486 PANTHER OS05G0424000 PROTEIN-RELATED 16 480 - -
Gso6g1319 486 Pfam Transmembrane amino acid transporter protein 43 473 IPR013057 -
Gso6g1319 486 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 16 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1319 Gso-Chr6 12924925 12931603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1319 22 486 Organic Solute Cotransporters AT5G09220 67.591 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1319 K24917 - gmx:100816507 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1761 4 47726936 47733998 Gso6g1319 6 12924925 12931603 GST
Gso4g1762 4 47737829 47744690 Gso6g1319 6 12924925 12931603 GST
Gso6g1319 6 12924925 12931603 Gso14g1212 14 28580652 28585261 PCT
Gso6g1319 6 12924925 12931603 Gso13g0160 13 10202345 10207211 PCT