Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01221 ATGGGTTCCATTGCAGAGGAGGAGGCTATGCCAAACCTAGTAGGCAGTGAGGAAAGGATTCTTGTTTCTGTTCGTGTGAGACCTCTGAATGAAAAGGAGCTCATAAGAAATGATCTTTCTGAATGGGAATGCATTAATGACACAACCATCATGTACAGGAGCAACCTTTCAGCTACAGAAAGGTCACTGTATCCAACAGCCTACACATTCGATCGAGTTTTTAGGACTGACAGCCCCACAAAGCAGGTGTATGAAGAAGCAGCTAAGGAAGTTGCTCTTTCAGTTCTCAGTGGCATCAACTCAAGCATTTTTGCTTATGGACAAACAAGCAGCGGAAAAACATACACCATGAGTGGTATAACAGATTTTGCCATAGCAGATATTTTCAACTACATAGAAAAGCACACGGAAAGGGAATTTGTTTTGAAGTTTTCAGCATTGGAGATCTATAATGAATCTGTCAGGGACCTCCTTAGTGTGGACAGTACACCTCTTAGACTTCTTGATGATCCAGAGAAAGGTACAGTTGTTGAGAGACTCACAGAGGAAACTTTAAGGGATTGGAGCCATTTTCAAGAACTTATTTCTTTCTGCGAAGCTCAAAGGCAGATAGGGGAGACTGCCCTGAATGAAGTGAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCTGCTCGTGAATTTCTGGGAAATGACAAAATGAGCTCCCTTTCTGCTTCTGTGAATTTCGTTGATCTTGCTGGGAGTGAGCGTTCATCCCAAACAAATTCAGCTGGTACGAGGTTGAAAGAGGGTTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTCATCCGCAAACTGAGTAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATACTGCAGTCCTCATTAGCAGGCAATGCTAAAACTGCAATCATCTGCACCATGAGCCCTGCAAGGAGCCATGTCGAACAAACAAGAAACACCCTTTTATTTGCAAGTTGTGCTAAAGAAGTGACAACTAATGCAAAAGTCAATGTAGTGGTGTCTGATAAGCTGTTGGTCAAGCAACTGCAAAAAGAGTTGGCTAGACTGGAAAGTGAGTTGAAAAATTCAGGGCCAACCCGCCTTAAATTTGATTCTGCAGCATTGCTGAAGGAAAAAGACCTCCAAATTGAGAGGCTAAAGAAAGAGGTAATGGATGTTTCGATGCAGCGGGACCTTGCTCAATCTCAAATTAAGGACATGCTACAAGTGGTTGGAGATGATGCGTCCTCAACTGAGCTGGACAGTTTAGGTCATCAATATCCCAAATTACGTGTGCGAAGTTCATTTGACTTTGAAAATCAAACAGCCGAACGACCAAATTTATCAAATTTTGACTGCATTGAGAGTGTCAGATCTTTTGATGCATCTCAATATTCAGATGGACACAGTATTAGTTCTGATGATAACTATTTCCAACTCCCTGATTTGCAAAAGAACCTACCCGTCAGGATTTCTTCCCCTGCGATTTCTATTGTAAGTGGTGATGCTGCAAAGAATGATTTGGATCAGAAAAACGTTGAAGATAGTTTAGGGGACCGTTGTAGGGAAGTTAGGTGCATTGAGTCAGATGATCTAACTACAAACACACACACACACTCTACTGCATCATCTCCAGCAGTCTCAGGATTAACTGAAGTTGATAATAGAGACAAAGAAAATCTAGATTTGTGTTCATCTGGGTTAAAGGACAACAAAGAAATAAACGGCTTGCAAGAACGTTTTGTTCTTCCCTCTCCTGAGAAAATATCTCCATGTCCGACACAAAGTAGTGCATCTAGTTCTAAAACCATGAAATTAACCAGAAGCAGAAGTTGTAAAGCAAGTCTCATGAGAGATCCATTTTCAGATTGGTTTGACCAAGAAGAAATGATTCAGAATACCCCCCCAATAGGAAGACCCGGGGGCCTTCAAAGGAAGACTTATACACTCAATTATAATCCCAATGCTGAGAGGTTATCATGGGCTGGTTACGAGAATTCTCTGGGAAGAGCTTCTGATGCACAGAATATGAAATCTTCCACCTATAATGGAAGTTACAAAGATAATTCTTTGGCACCTGTAAGAAAAGAAAAGAATGATCTTGAAAGTTCAAATATGCAAGCGAATCTTGAGGTTCAAGAGACAGGAATGGAGTCCGATGTTACTACAAAGAAGTTCAAAGATGTTGGTTTGGACCCATTGCAATCTGAGGAAGAAAAACAGTTGGAATGGCCTTCAGAATTCAAGCGGCTGCAGAAAGAGATTATTGAACTCTGGCATGCCTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTGTTCAAAGGAGACCCTTCAGATTCTATCTATATGGAAGTAGAGCTAAGAAGGCTGTTCTATCTCAAGCAAACTTTTGACCAAGGGAATCAGACTGTGGAAGATGGACTTACCCCTGAATCAAGCAAGAGGTATCTTAGAGGAGAAAGACAGATGTTGAGCAAGCAAATGCAGAAGAAGCTGTCAAAATCTGAAAGAGAGAACCTGTACAATAATTGGGGAATTCGTTTGAGTTCAAAGAACAGAAGGTTGCACTTGGCCCATCGCTTGTGGTCAGAATCAGATGACTTAGAGCACATTAGAGAGAGTGCCACCATTGTTGCAAAGCTGGTTGGTTCAGTAGAGCCAGATCAGGCTTTTAAGGAGATGTTTGGGCTCAACTTTGCCCCAAGGCGCACAAGAAAGAAATCGTTTGGTTGGACAGCCAGTATGAAGAATATTTTGTGA 2808 0.416 MGSIAEEEAMPNLVGSEERILVSVRVRPLNEKELIRNDLSEWECINDTTIMYRSNLSATERSLYPTAYTFDRVFRTDSPTKQVYEEAAKEVALSVLSGINSSIFAYGQTSSGKTYTMSGITDFAIADIFNYIEKHTEREFVLKFSALEIYNESVRDLLSVDSTPLRLLDDPEKGTVVERLTEETLRDWSHFQELISFCEAQRQIGETALNEVSSRSHQILRLTIESSAREFLGNDKMSSLSASVNFVDLAGSERSSQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLAGNAKTAIICTMSPARSHVEQTRNTLLFASCAKEVTTNAKVNVVVSDKLLVKQLQKELARLESELKNSGPTRLKFDSAALLKEKDLQIERLKKEVMDVSMQRDLAQSQIKDMLQVVGDDASSTELDSLGHQYPKLRVRSSFDFENQTAERPNLSNFDCIESVRSFDASQYSDGHSISSDDNYFQLPDLQKNLPVRISSPAISIVSGDAAKNDLDQKNVEDSLGDRCREVRCIESDDLTTNTHTHSTASSPAVSGLTEVDNRDKENLDLCSSGLKDNKEINGLQERFVLPSPEKISPCPTQSSASSSKTMKLTRSRSCKASLMRDPFSDWFDQEEMIQNTPPIGRPGGLQRKTYTLNYNPNAERLSWAGYENSLGRASDAQNMKSSTYNGSYKDNSLAPVRKEKNDLESSNMQANLEVQETGMESDVTTKKFKDVGLDPLQSEEEKQLEWPSEFKRLQKEIIELWHACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLFYLKQTFDQGNQTVEDGLTPESSKRYLRGERQMLSKQMQKKLSKSERENLYNNWGIRLSSKNRRLHLAHRLWSESDDLEHIRESATIVAKLVGSVEPDQAFKEMFGLNFAPRRTRKKSFGWTASMKNIL 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01221 935 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 935 - -
Gma16g01221 935 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma16g01221 935 Gene3D Kinesin motor domain 12 374 IPR036961 -
Gma16g01221 935 MobiDBLite consensus disorder prediction 602 619 - -
Gma16g01221 935 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 Coils Coil 389 416 - -
Gma16g01221 935 MobiDBLite consensus disorder prediction 547 567 - -
Gma16g01221 935 PANTHER CENTROMERE PROTEIN E 2 935 - -
Gma16g01221 935 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Gma16g01221 935 MobiDBLite consensus disorder prediction 598 619 - -
Gma16g01221 935 CDD KISc_CENP_E 20 343 - -
Gma16g01221 935 Pfam Domain of unknown function (DUF3490) 760 917 IPR021881 -
Gma16g01221 935 MobiDBLite consensus disorder prediction 547 563 - -
Gma16g01221 935 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01221 935 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01221 Gma-Chr16 29983248 29989119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01221 20 373 Miscellaneous Gene Families AT2G21380 46.389 1.53e-85 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01221 K11498 - gmx:100775190 1807.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00459 02 4622665 4629334 Gma16g01221 16 29983248 29989119 ECH
Gma04g00074 04 635383 641184 Gma16g01221 16 29983248 29989119 ECH
Gma06g00067 06 618614 624208 Gma16g01221 16 29983248 29989119 ECH
Gma16g01221 16 29983248 29989119 Gma11g00682 11 5695778 5702874 ECH
Gma16g01221 16 29983248 29989119 Gma01g01718 01 52871002 52877432 ECH
Gma16g01221 16 29983248 29989119 Gma02g00459 02 4622665 4629334 ECH
Gma16g01221 16 29983248 29989119 Gma16g01221 16 29983248 29989119 ECH
Gma11g01012 11 8589179 8594938 Gma16g01221 16 29983248 29989119 ECH
Gma12g00329 12 2725252 2730734 Gma16g01221 16 29983248 29989119 ECH
Gma16g01221 16 29983248 29989119 Gma02g00459 02 4622665 4629334 GST
Gma11g00682 11 5695778 5702874 Gma16g01221 16 29983248 29989119 PCT
Gma16g01221 16 29983248 29989119 Gma11g00682 11 5695778 5702874 PCT