Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01718 ATGGGTTTTGTTGGAGGGGAAGAAGCCATTCAAGAGCCTACAGGGCATGATGAGAGGATTCTTGTTTCGGTTCGTCTTCGTCCCCTCAACGAAAAGGAGCTTGCAAGAAATGATGTTTCAGATTGGGAATGCATCAGTGACACTGCCATCATATACAGGAGCAACCTTTCAGCTTCTGACAGGTCACTCTACCCAACAGCATATTCCTTTGACAGTGTGTTTCGAACAAATTCTTCTACAAGGCAGGTGTATGAAAAAGCAGCTAAGGAAGTTGCTCTTTCAGTTGTCGGTGGCATCAACTCAAGCATTTTCGCATATGGACAAACAAGCAGTGGGAAGACATACACCATGAGTGGCATAACTGAATACACAGTGGCAGACATTTTTAACTACATAGAAAAGCACAAGGAAAGAGAATTCATGTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTCAGGGACCTCCTTAGTCCAGACTGTACTCCTCTCAGACTTCTTGATGATCCAGAGAGAGGGACAGTTGTTGAGAGACTGACTGAGGAAACTTTAAGAGATTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACAGCACTGAATGAAGCAAGCTCCAGATCTCATCAAATTTTAAGACTGACAATTGAAAGTTCTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCTGGTAGCGAGCGAGCATCCCAAACCCATTCAGCTGGCACGAGATTGAAAGAGGGTTGCCACATAAATCGTAGCTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCATTAGGGGGCAATGCTAGAACTGCTATCATCTGCACCATGAGCCCTGCTCGGAGCCACGTTGAACAAACCAGAAACACACTCTTATTTGCAAGCTGTGCTAAAGAAGTGTCAACTAATGCACAAGTCAATGTAGTAATGTCTGATAAAGCACTAGTCAAGCAATTACAAAAAGAGTTGGCTAGACTGGAAGATGAACTGAGAAATTCAGGGCCAGCCCACCTTACATCTGAGACTGCAGCATTGTTGAGAGAAAAAGACCGTCAAATCGATATGTTAAAGAAAGAGGTAAGAGAGCTGACCTTGCAGCGGGACCTTGCACATTCTCGAATTAGTGGCATGCTCCAAGTGCATGGAGAAGATGTGGCTACAAAAGAACTGGAAAGTATGGATCCTCAATATCCAAATTTACATATGAGAAATTCATGGAACTTTGAAAATCAAAGAGAGGAGCCAAATGTATTAAGTCTTGATGGTGAAGAGAGTGTCAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGATAACTTATTCCAACTCCCTGACCTTGAAAAGAATCTTCTGGTCAGAAGTTCTCCCCCAGGGTTGCCAGTCAAAAGGACTGATGCTGCACCGAATGATTTGGATCAGAAAAGCATTGAAGATCAGCATGAAGAGGACAATTGTAAGGAAGTTAGGTGCATTGAGTTAGAAGACGTAATTACAAACACGCATAAACACTCAAACTCAGCAGATTTAAGATCACATACATACACTGATTCGAATGCATCATCTCCTAGTGCAAACACAGCTATCTTAGGATTGGTTGTAGTTGATAATAGAGACAAGGCAAAAGTAGTAGATTTGAGTTCTTCTCTGTCAAAGGAAGACAAAAGATTGAACAATATGCACCAAGATTTTGTTCTTCCCTCTCCAAAAGAAATTTCTGTGTGCATGACAGGAAACAGTACAAGTAGTTCTAGAACCTTGAAGTTGAGCCGAAGTAGAAGTTGTATAGCAAGTATCATGAGGAATTTATCTTCAGATTGGTTTGAAGATGAAGACGTAATTCAGAACACTCCTCCAATGGGGAATGAAAAAGCCTTCCCTGGAAGACCAGAGGGCTTTCCGAAGAACATTTATGCACTAAATTACAATGCCAATGCAGAGAGGCTTTCATGTAATGGCCATGGGAATTCTGTGCAAAATTCTTCTGTTCATGATGTTCAGAATGTGAAATCCTCCACTAACAAGGAAAGAGAGGGTAATGGTCCCTTGGCTCCAAAAGGAAAGGAAACAGAAAATCTTAACAGGTTGAGTTTACTGGCTGACCATGAGGTTCTGGGGACAGGATTGGATCCCATCTTGTCTGCAAAGAATGTCAAAGATATTGGCTTGGATCCCATGCAAGCTGATGGAGAAACTCACTCACACTCACATTGGCCTTCAAAATTCCAGAGGCTGCAAAGAGAGATCATTGAATTCTGGGATGCGTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCAAAGGGGAACCATCAGATTCTATTTATATGGAGGTAGAGTTGAGAAGACTATCATACCTTACGCAAACTTTTTCCCAAGGCAATCAAACTGTGGAAGATGGACGAACCCTCACACCTGAGTTAAGCATGAGATATCTTAGAAAAGAGAGGCAAATGCTGAGCAAGCAAATGCATAAGCGACTGTCTAAATATGATAGACAGAACCTGTACTTGAAATGGGGCCTTCGTTTGAGTTCAAAGCATAGGAGTTTGCAGTTGGCCCATCAATTGTGGAGTGACACAAAAGACATGGACCACGTTAGAGACAGTGCATCAATTGTTGCAAAGCTGGTTGGTTTAGTAGAGCCAGAACAGGCATTTAAGGAGATGTTTGGACTCAACTTTACCCCACAACCCACGAGTAGAAAATCTTTTAGTTGGACAGCCAGTGTGAGGCATATTTTGTGA 2901 0.4178 MGFVGGEEAIQEPTGHDERILVSVRLRPLNEKELARNDVSDWECISDTAIIYRSNLSASDRSLYPTAYSFDSVFRTNSSTRQVYEKAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITEYTVADIFNYIEKHKEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVERLTEETLRDWNHFTELISFCEAQRQIGETALNEASSRSHQILRLTIESSAREFLGNDKSSSLSASVNFVDLAGSERASQTHSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVSTNAQVNVVMSDKALVKQLQKELARLEDELRNSGPAHLTSETAALLREKDRQIDMLKKEVRELTLQRDLAHSRISGMLQVHGEDVATKELESMDPQYPNLHMRNSWNFENQREEPNVLSLDGEESVRSFDASQYSDGHSFSSDDNLFQLPDLEKNLLVRSSPPGLPVKRTDAAPNDLDQKSIEDQHEEDNCKEVRCIELEDVITNTHKHSNSADLRSHTYTDSNASSPSANTAILGLVVVDNRDKAKVVDLSSSLSKEDKRLNNMHQDFVLPSPKEISVCMTGNSTSSSRTLKLSRSRSCIASIMRNLSSDWFEDEDVIQNTPPMGNEKAFPGRPEGFPKNIYALNYNANAERLSCNGHGNSVQNSSVHDVQNVKSSTNKEREGNGPLAPKGKETENLNRLSLLADHEVLGTGLDPILSAKNVKDIGLDPMQADGETHSHSHWPSKFQRLQREIIEFWDACNVSLVHRTYFFLLFKGEPSDSIYMEVELRRLSYLTQTFSQGNQTVEDGRTLTPELSMRYLRKERQMLSKQMHKRLSKYDRQNLYLKWGLRLSSKHRSLQLAHQLWSDTKDMDHVRDSASIVAKLVGLVEPEQAFKEMFGLNFTPQPTSRKSFSWTASVRHIL 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01718 966 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 MobiDBLite consensus disorder prediction 701 738 - -
Gma01g01718 966 Pfam Domain of unknown function (DUF3490) 789 949 IPR021881 -
Gma01g01718 966 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma01g01718 966 MobiDBLite consensus disorder prediction 500 530 - -
Gma01g01718 966 Coils Coil 389 416 - -
Gma01g01718 966 Gene3D Kinesin motor domain 10 374 IPR036961 -
Gma01g01718 966 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 PANTHER CENTROMERE PROTEIN E 2 966 - -
Gma01g01718 966 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g01718 966 MobiDBLite consensus disorder prediction 701 726 - -
Gma01g01718 966 CDD KISc_CENP_E 20 343 - -
Gma01g01718 966 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 966 - -
Gma01g01718 966 MobiDBLite consensus disorder prediction 516 530 - -
Gma01g01718 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Gma01g01718 966 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01718 Gma-Chr1 52871002 52877432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01718 2 373 Miscellaneous Gene Families AT2G21380 44.063 2.79e-84 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01718 K11498 - gmx:100809766 1898.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00682 11 5695778 5702874 Gma01g01718 01 52871002 52877432 ECH
Gma04g00074 04 635383 641184 Gma01g01718 01 52871002 52877432 ECH
Gma06g00067 06 618614 624208 Gma01g01718 01 52871002 52877432 ECH
Gma16g01221 16 29983248 29989119 Gma01g01718 01 52871002 52877432 ECH
Gma01g01718 01 52871002 52877432 Gma01g01718 01 52871002 52877432 ECH
Gma11g01012 11 8589179 8594938 Gma01g01718 01 52871002 52877432 ECH
Gma12g00329 12 2725252 2730734 Gma01g01718 01 52871002 52877432 ECH