Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00682 ATGGATTCTGTTGGAGGGGAAGAGGCAATTCAAGAGCCTACAGACCATGATGAGAGGATTCTTGTTTCGGTTCGTCTTCGTCCCCTTAATGAAAAGGAGCTTGCAAGAAATGATGTTTCAGATTGGGAATGCATCAATGACACCACCATCATATACAGGAGCAACCTTTCAGCTACTGACAGGTCACTCTACCCAACAGCATATTCCTTTGACAGTGTGTTTCGAACAGATTCTTCTACAAGGCAGGTGTATGAAAAAGCAGCTAAGGAAGTTGCTCTTTCAGTTGTCGGTGGCATCAACTCAAGCATTTTTGCATATGGACAAACAAGTAGTGGGAAGACATACACCATGAGTGGCATAACTGAATACACAGTGGCAGACATTTTTAACTACATTGAAAAGCACACGGAAAGAGAATTCATGTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTAAGGGACCTCCTTAGTCCAGACTGTACCCCTCTCAGACTTCTCGATGATCCAGAGAGAGGGACAGTTGTTGAGAGACTGACTGAGGAAACTTTAGGAGATTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACAGCACTGAATGAAGCAAGCTCCAGATCTCATCAAATTCTAAGACTGACAATTGAAAGTTCTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCTGGTAGCGAGCGAGCATCCCAAACCCATTCAGCTGGCACGAGATTGAAAGAGGGTTGCCACATAAATCGTAGCTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCATTAGGAGGCAATGCTAGAACTGCTATCATCTGCACCATGAGCCCTGCCCGGAGCCATGTTGAACAAACCAGAAACACACTCTTATTTGCAAGCTGTGCTAAAGAAGTGTCAACTAATGCACAAGTCAATGTAGTGGTGTCTGATAAAGCACTAGTCAAGCAATTACAAAAAGAGTTGGCTAGACTGGAAGATGAATTGAGAAATTCAGGGCCAGCCCACCTTACTTCTGAGACTGCAGCATTGTTGAGAGAAAAAGACCGTCAGATCGATATGTTAAAGAAAGAGGTAAGAGAGCTGACCTTGCAGCGGGACCTTGCACAATCTCGAATAAGTGACATGCTCCGAGTGCATGGAGAAGATGTGGCTACAATAGAACTGCAAAGTATGGATCCTCAATATCCAAATTTACACATGAGAAATTCATGGAACTTTGAAAATCAAAGAGAGGAGCCAAATGTATTAAGTCTTGATGGTGAAGAGAGTGTCAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGAAAACTTATTCCAACTCCCTGACCTTGAAAAGAATCTTCTGGTCAGAAATTCTCCCCCAGGGTTGCCAGTCAAAAGGACTGATGCTGTACCGAATGATTTGGATCAGAAACGCATTGAAGAACAGCATGAAGAGGACAATTGTAAGGAAGTTAGATGCATTGAGTTGGAAGATGTAATCACAAACACACATAAACACTCAAATACATCAGATTTAAGATCAAATACATACACTGATTCTAATGCATCATCTCCTAGTGCAAACACAGCTATCTCAGGATTGATTGTAGTTGATAATAGAGACAAGGAAAAAGTAGTAGATTTGAGTTCATCTGGGTCAAAGGAAGACAAAAGATTGAACCATTTGCACCAAGATTTTGTTCTTCCCTCTCCAAAAGAAATTTCTGTGTGCATGACAGGAAACAGTACAAGTAGTTCTAGAACTTTGAAGTTGAGCCGAAGTAGAAGTTGTAAAGCAAGTATCATGAGGAATTTATCTTCAGATTGGTTTGAAGATGTAGACGTAATTCAGAACACTCCTCCAATAGGGATTGAAAAAGCCTTCCCTGGAAGACCGGAGGGCTTTCCGAAGAACATTTATGCACTAAACTATAATGCCAATGCAGAAAGGCTTTCATGTAATGGCCATGGGAATTCTGTACAAAATTCTTCTGTTGATGATGTACAGAATGTGAAATCCTCCACTAACAAGGAAAGAGAGGGAACAGAAAATATTAACAGGTTGAATTTACTGGCTGGCCATGAGGTTCCGGGGACAGGATTGGATTATGCAAAGAATGTCAAAGATATTGGCTTGGACCCCATGCAAACTGATGGAGAAAGTCTCTCACACTCACACTGGCCTTCAAAATTCCAGAGGCTGCAAAGAGAGATCATTGAATTCTGGGATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCAAGGGGGAACCATCAGATTCTATTTATATGGAGGTAGAGTTGAGAAGACTATCATACCTCAAGCAAACGTTTTCCCAAGGCAATCAGACTGTGGAAGATGGACGAACCCTCGCACCTGAGTTAAGCATGAGATATCTTAGAAAAGAGAGGCAGATGCTGAGCAAGCAAATGCATAAGAGACTGTCTAAATATGATAGGCAGAACCTGTACTTGAGATGGGGCCTTCGTTTGAGTTCAAAGCATAGGAGTTTGCAGTTGGCCCATCAATTGTGGAGTGACACAAAAGACATGGACCACGTTAGAGACAGTGCATCAATTGTTGCAAAGCTGGTTGGTTTAGTAGAGCCAGAACAAGCATTTAAGGAGATGTTTGGACTCAACTTTACCCCACAACCTACGAGTAGGAAATCTTTTAGTTGGACAGCCAGTGTGAGGCACATTTTGTGA 2862 0.4161 MDSVGGEEAIQEPTDHDERILVSVRLRPLNEKELARNDVSDWECINDTTIIYRSNLSATDRSLYPTAYSFDSVFRTDSSTRQVYEKAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITEYTVADIFNYIEKHTEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVERLTEETLGDWNHFTELISFCEAQRQIGETALNEASSRSHQILRLTIESSAREFLGNDKSSSLSASVNFVDLAGSERASQTHSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVSTNAQVNVVVSDKALVKQLQKELARLEDELRNSGPAHLTSETAALLREKDRQIDMLKKEVRELTLQRDLAQSRISDMLRVHGEDVATIELQSMDPQYPNLHMRNSWNFENQREEPNVLSLDGEESVRSFDASQYSDGHSFSSDENLFQLPDLEKNLLVRNSPPGLPVKRTDAVPNDLDQKRIEEQHEEDNCKEVRCIELEDVITNTHKHSNTSDLRSNTYTDSNASSPSANTAISGLIVVDNRDKEKVVDLSSSGSKEDKRLNHLHQDFVLPSPKEISVCMTGNSTSSSRTLKLSRSRSCKASIMRNLSSDWFEDVDVIQNTPPIGIEKAFPGRPEGFPKNIYALNYNANAERLSCNGHGNSVQNSSVDDVQNVKSSTNKEREGTENINRLNLLAGHEVPGTGLDYAKNVKDIGLDPMQTDGESLSHSHWPSKFQRLQREIIEFWDACNVSLVHRTYFFLLFKGEPSDSIYMEVELRRLSYLKQTFSQGNQTVEDGRTLAPELSMRYLRKERQMLSKQMHKRLSKYDRQNLYLRWGLRLSSKHRSLQLAHQLWSDTKDMDHVRDSASIVAKLVGLVEPEQAFKEMFGLNFTPQPTSRKSFSWTASVRHIL 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00682 953 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 Pfam Domain of unknown function (DUF3490) 776 936 IPR021881 -
Gma11g00682 953 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 PANTHER CENTROMERE PROTEIN E 2 953 - -
Gma11g00682 953 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma11g00682 953 Coils Coil 389 416 - -
Gma11g00682 953 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 953 - -
Gma11g00682 953 MobiDBLite consensus disorder prediction 552 572 - -
Gma11g00682 953 CDD KISc_CENP_E 20 343 - -
Gma11g00682 953 Gene3D Kinesin motor domain 10 374 IPR036961 -
Gma11g00682 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Gma11g00682 953 Coils Coil 352 372 - -
Gma11g00682 953 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g00682 953 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00682 Gma-Chr11 5695778 5702874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00682 8 373 Miscellaneous Gene Families AT2G21380 44.504 3.81e-84 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00682 K11498 - gmx:100802226 1879.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00682 11 5695778 5702874 Gma01g01718 01 52871002 52877432 ECH
Gma04g00074 04 635383 641184 Gma11g00682 11 5695778 5702874 ECH
Gma06g00067 06 618614 624208 Gma11g00682 11 5695778 5702874 ECH
Gma16g01221 16 29983248 29989119 Gma11g00682 11 5695778 5702874 ECH
Gma11g00682 11 5695778 5702874 Gma11g00682 11 5695778 5702874 ECH
Gma11g01012 11 8589179 8594938 Gma11g00682 11 5695778 5702874 ECH
Gma12g00329 12 2725252 2730734 Gma11g00682 11 5695778 5702874 ECH
Gma11g00682 11 5695778 5702874 Gma16g01221 16 29983248 29989119 PCT
Gma11g00682 11 5695778 5702874 Gma02g00459 02 4622665 4629334 PCT
Gma16g01221 16 29983248 29989119 Gma11g00682 11 5695778 5702874 PCT
Gma02g00459 02 4622665 4629334 Gma11g00682 11 5695778 5702874 PCT