Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00329 ATGGGAGCTATTGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGCAGTCGCGAAGAGAAGATTCTGGTGTCAATAAGACTGAGGCCTTTGAATGAGAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACCGGAACACGCTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAGAGTATTTCGGGGTGATTGTGTCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCAGTTGTCAGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAATACGCTGTTGCAGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACGGACAACACTCCACTTAGACTACGTGATGATCCTGAGAAAGGGCCCATTTTAGAGAAACTCACAGAGGAGACTCTACGGGACTGGGAGCATTTAAAAGAGCTTCTAGCCTACAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATTATAAGATTGACAATGGAGAGTTCTGCCAGGGAATTCCTGGGCAAGGGCAACTCAGCGACCCTAGTAGCTAGTGTGAATTTAGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCAGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGTAAGCTTAGTAAGGGAAGACATGGACACATCAATTACAGAGACTCCAAGTTGACACGCATACTGCAGCCTTGTTTGGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGTAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAGGTGACCACTAAAGCGCAGGTTAATGTCGTGATGTCTGATAAGGCGTTGGTCAAGCATTTGCAAAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAAAACTCCTGGTCCTGCTACCTCCAATTGTGATTATGCAGCATTATTGAGAAAGAAAGATCTTCAGATAGAAAAGATGGAGAAGGAGATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTTCGCATGGTCGGAAAGGATCAGATATCTGGAAAAGAAGGGGAAGATATCTGGGAAGATGATTGTTCAGTATCAGAGTCATCCAGCATTTGTGGTCCTCATCGTCCTAATACACATATTAGAGAGTTCAACAATCCTCATTATAATGATGGAGACAGTGATCCTGATGAAGACCCTGATGATTATTGCAAAGAAGTTCGATGTGTTGAGAATGGGGAGTTAGCTTTACCAATATCTGGAGACGAAAGTGGAATAAGCCAAGAAATATCTTCACATTTGAATGAAGATACTGGAGACAGTCAGATCCAAGAAAATTCAACATTGCTGGAGCAGAGACTGCATGTTGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACAATCTCCACAGGTCATGTCAGAAAATAATAAGAATCTTAGATTAACTAGAAGCTGGAGTTGTACGGAATATCACATGACTGGTTCTCCCGAGTCAGTAGGGGGAATACAGAGGACTCCAGCCAATGGATATGAAAAAGGATTCCCTGGAAGGCCAGATGGTTTGCAGAAGTTTCCTCCATTAAATTATGATGGTTCCACAAAATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCCAGCAGCATCAGAACATCTGCTGATGAGGATATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAGAAGCATCTTGTTGATGGTCAGGATCAGGAGACAGGAAGAAAGAACGTGAAAGATGTGGGTGTGGATCCGATGTTGGAGGCGCCTAGATCTCCTTTAGATTGGTCTCTGCAATTCAAGAGACAGCAGAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCAACAGACTCCATTTACATGGAGGTAGAACTTAGAAGATTATCCTTCCTCAAAGAATCATTTTCTGATGGAAACCAGTCTGTGAGCGATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCTCTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCAGAGGAGGCTTTCGGAGAAGGAGCGAAGAAGGCTATACGAGGAGTGGGGCATTGCATTGGATTCAAAGCGCAGGAGGGTGCAACTAGGGAACCGTTTATGGAGCGAAAATGATATGAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTGAGGTTTTGGGAAAGAGGCAAGGCCCTCAAGGAGATGTTTGGCCTTAGCTTCACACCCCAACTCACGGGGCGAAGATCATCTTATCCATGGAAAAATAGCTCAACATCTCTTTTATAG 2658 0.4319 MGAIAGEELLKWEKMQGVSSREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIKRHEERAFILKFSAIEIYNEIVRDLLSTDNTPLRLRDDPEKGPILEKLTEETLRDWEHLKELLAYSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVASVNLVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGPATSNCDYAALLRKKDLQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKDQISGKEGEDIWEDDCSVSESSSICGPHRPNTHIREFNNPHYNDGDSDPDEDPDDYCKEVRCVENGELALPISGDESGISQEISSHLNEDTGDSQIQENSTLLEQRLHVVQSTIDSLVCPSPDEQSPQVMSENNKNLRLTRSWSCTEYHMTGSPESVGGIQRTPANGYEKGFPGRPDGLQKFPPLNYDGSTKLLRNGSQSSMGSLSVDDLRASSIRTSADEDITSIHTFVAGMKEMVKQEYEKHLVDGQDQETGRKNVKDVGVDPMLEAPRSPLDWSLQFKRQQKEIIELWQSCCVPLTHRTYFFLLFRGDPTDSIYMEVELRRLSFLKESFSDGNQSVSDSQTITLASSVKALRRERGMLVKLMQRRLSEKERRRLYEEWGIALDSKRRRVQLGNRLWSENDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQLTGRRSSYPWKNSSTSLL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00329 885 Gene3D Kinesin motor domain 15 377 IPR036961 -
Gma12g00329 885 Coils Coil 355 375 - -
Gma12g00329 885 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 CDD KISc_CENP_E 24 346 - -
Gma12g00329 885 Coils Coil 392 426 - -
Gma12g00329 885 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma12g00329 885 Pfam Domain of unknown function (DUF3490) 708 867 IPR021881 -
Gma12g00329 885 MobiDBLite consensus disorder prediction 452 483 - -
Gma12g00329 885 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 PANTHER CENTROMERE PROTEIN E 6 885 - -
Gma12g00329 885 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00329 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 379 IPR027417 -
Gma12g00329 885 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00329 Gma-Chr12 2725252 2730734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00329 22 427 Miscellaneous Gene Families AT5G06670 39.372 1.03e-82 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00329 K11498 - gmx:100820012 1742.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00329 12 2725252 2730734 Gma12g00329 12 2725252 2730734 ECH
Gma12g00329 12 2725252 2730734 Gma11g00682 11 5695778 5702874 ECH
Gma12g00329 12 2725252 2730734 Gma01g01718 01 52871002 52877432 ECH
Gma12g00329 12 2725252 2730734 Gma02g00459 02 4622665 4629334 ECH
Gma12g00329 12 2725252 2730734 Gma16g01221 16 29983248 29989119 ECH
Gma12g00329 12 2725252 2730734 Gma11g01012 11 8589179 8594938 GST