Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01012 ATGGGAGCTATTGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGTAGTCGCGAAGAGAAGATTCTGGTGTCAATAAGACTGAGGCCTCTGAATGAGAAGGAAATTGCTGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTACCGGAACACACTGCGTGAGGGTTCCACATTTCCAAGCGCCTACACATTTGACAGAGTATTTCGGGGTGATTGTGTCACGAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCAGTTGTCAGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAATACGCTGTTGCAGATATTTTTGACTATATAGAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAGTTGTTAGAGACCTCCTCAGCACTGACAACAACACTCCACTTAGACTACGTGATGATCCTGAGAAAGGGCCCATTTTAGAGAAACTCACAGAGGAGACTCTACGGGACTGGGAGCATTTAAAAGAGCTTCTAGCCTTCAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATCATCAGATTGACAATGGAGAGTTCTGCCAGGGAATTCCTGGGCAAAGGCAACTCAGCCACCCTAATAGCTAGTGTGAATTTAGTTGATTTGGCAGGGAGTGAGCGCGCATCTCAGGCATCATCAGCTGGGATGAGATTAAAAGAAGGTTGTCATATAAACCGGAGCTTACTGACTCTTGGAACAGTTATTCGTAAGCTTAGCAACGGAAGACATGGACACATCAATTACAGAGATTCCAAGTTGACACGCATACTGCAGCCTTGTTTGGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTCGTGATGTCTGATAAGGCGCTGGTTAAGCATTTGCAAAAAGAGGTGGCTAGATTGGAGAGTGAGTTGAAAACTCCTGGTCCTGTACCCTCCAATTGTGATTATGCAGCATTGTTGAGAAAGAAAGATGTCCAGATAGAAAAGATGGAGAAGGAGATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAGGATTTGCTTCGCATGGTTGGAAAGGAGCAGATATCTGGAAAAGAAGGGGAAGATATCTGGGAAGATGACTGTTCAGTATCAGAGTCATCAAGCATTTGTGGTCCTCATCGTCCTAATACACACATTAGAGAGTTCAACAATCCTCATTATAATGATGAAGACAGTGATCCTGATGACGACCCTGATGATTATTGCAAAGAAGTTCGATGTGTTGAGAATGGGGAGTTAGCTTTACCAATATCTGGAGAGGAAAGTGGAACAAGCCAAGAAATATCTTCACATTTGAATGAAGATACCGGAGACAGTCAGATCCAAGAAAATTCAACATTGCTGGAGCAGAGATTGCATGTTGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACACTCTCCACAGGTCATGTCAGAAAATAATAAGAATCTTAGATTAACTAGAAGCTGGAGTTGTACGGAACATCACATGGCTGGTTCTCCCAAGTCAGGCGGAGGAGTACAGAGGACTCCAGCCAATGGATATGAAAAAGGATTCCCTGGAAGACCAGATGGTTTGCAGAGAAAGTTTCCTCCATTAAATTATGATGGTTCAACAAGATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCCAGCAGCATCAGAACATCTGCTGATGAGGATATTACTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACAAGAATATGAGAAACAGCTTGTTGATGGTCAGGATCAGGAGACAGGAAGAAAGAACGTGAAAGATGTAGGTGTGGATCCGATGTTGGAGGCACCTGGAGGAACTCCATTAGATTGGTCTCTGCAATTCAAGAGACATCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCATCAGACTCCATTTACATGGAGGTAGAACTTAGAAGATTGTCCTTCCTCAAAGAATCATTTTCTGATGGAAACAAGTCTGTGAGAGATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCACTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCAGAGGAGGCTTTCCGAGAAGGAGAGAAGAAGGCTATACGAGGAGTGTGGCATTGCATTGGATTCAAAGCGCAGGAGGGTACAACTAGCGAACAGTTTATGGAGCGAAAATGATATGAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTGAGGTTTTGGGAACGAGGCAAGGCCCTCAAGGAGATGTTTGGCCTTAGCTTCACACCCCAACTCACAGGGCGAAGATCCTCTTATCCATGGAAAAATAGCTCAGCATCTCTTTTATAG 2667 0.4331 MGAIAGEELLKWEKMQGVSSREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIERHEERAFILKFSAIEIYNEVVRDLLSTDNNTPLRLRDDPEKGPILEKLTEETLRDWEHLKELLAFSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLIASVNLVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSNGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGPVPSNCDYAALLRKKDVQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKEQISGKEGEDIWEDDCSVSESSSICGPHRPNTHIREFNNPHYNDEDSDPDDDPDDYCKEVRCVENGELALPISGEESGTSQEISSHLNEDTGDSQIQENSTLLEQRLHVVQSTIDSLVCPSPDEHSPQVMSENNKNLRLTRSWSCTEHHMAGSPKSGGGVQRTPANGYEKGFPGRPDGLQRKFPPLNYDGSTRLLRNGSQSSMGSLSVDDLRASSIRTSADEDITSIQTFVAGMKEMVKQEYEKQLVDGQDQETGRKNVKDVGVDPMLEAPGGTPLDWSLQFKRHQKEIIELWQSCCVPLTHRTYFFLLFRGDPSDSIYMEVELRRLSFLKESFSDGNKSVRDSQTITLASSVKALRRERGMLVKLMQRRLSEKERRRLYEECGIALDSKRRRVQLANSLWSENDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQLTGRRSSYPWKNSSASLL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01012 888 Pfam Domain of unknown function (DUF3490) 711 870 IPR021881 -
Gma11g01012 888 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 888 - -
Gma11g01012 888 Coils Coil 393 427 - -
Gma11g01012 888 Pfam Kinesin motor domain 30 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma11g01012 888 Gene3D Kinesin motor domain 15 378 IPR036961 -
Gma11g01012 888 ProSiteProfiles Kinesin motor domain profile. 24 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 379 IPR027417 -
Gma11g01012 888 MobiDBLite consensus disorder prediction 498 525 - -
Gma11g01012 888 MobiDBLite consensus disorder prediction 504 525 - -
Gma11g01012 888 CDD KISc_CENP_E 24 347 - -
Gma11g01012 888 SMART kinesin_4 22 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma11g01012 888 PANTHER CENTROMERE PROTEIN E 6 888 - -
Gma11g01012 888 Coils Coil 356 376 - -
Gma11g01012 888 MobiDBLite consensus disorder prediction 450 485 - -
Gma11g01012 888 MobiDBLite consensus disorder prediction 578 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01012 Gma-Chr11 8589179 8594938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01012 22 428 Miscellaneous Gene Families AT5G06670 39.857 9.86e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01012 K11498 - gmx:100788096 1740.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01012 11 8589179 8594938 Gma11g01012 11 8589179 8594938 ECH
Gma11g01012 11 8589179 8594938 Gma11g00682 11 5695778 5702874 ECH
Gma11g01012 11 8589179 8594938 Gma01g01718 01 52871002 52877432 ECH
Gma11g01012 11 8589179 8594938 Gma02g00459 02 4622665 4629334 ECH
Gma11g01012 11 8589179 8594938 Gma16g01221 16 29983248 29989119 ECH
Gma12g00329 12 2725252 2730734 Gma11g01012 11 8589179 8594938 GST