Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00385 ATGGCAACGGATTCTTCAAATGGTAATGGACATCACCAGACAACAACAAAGCAGCCTCCTTTGCCATCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGGTCTCACTTAGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACTGGATCCAAGGATAACCTCAAAAAGTGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTATTGATCGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTAAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTCGCTAAGCGAGTAGGAGCAAGGATTCTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGTTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGGGTGGCTGAGACATTGATGTTTGATTACCATAGGCAGCATGGAATTGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGGGGGGAACCATTGACAGTCCAATGTCCGGGAACACAAACTCGAAGTTTCTGTTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGAAGGATCAAACACCGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGACCCACGACAAAGAAAACCAGACATCACAAAAGCAAAGGAATTGTTGGGCTGGGAGCCAAAGGTCAAGTTGCGTGATGGTCTTCCTCGTATGGAAGAGGATTTCCGTCTGAGGCTTGGAGTTGGCAAAAAGAATTAA 1047 0.4422 MATDSSNGNGHHQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVSDLVDGLIRLMEGSNTGPINLGNPGEFTMTELAETVKELINPGVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPRMEEDFRLRLGVGKKN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00385 348 Gene3D - 34 341 - -
Gma15g00385 348 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 348 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gma15g00385 348 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 348 - -
Gma15g00385 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 339 IPR036291 -
Gma15g00385 348 CDD UGD_SDR_e 35 339 - -
Gma15g00385 348 Pfam GDP-mannose 4,6 dehydratase 38 334 IPR016040 -
Gma15g00385 348 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00385 Gma-Chr15 3223103 3228182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00385 37 347 Miscellaneous Gene Families AT4G00110 24.277 1.96e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00385 K08678 - gmx:100790835 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00385 15 3223103 3228182 Gma15g00385 15 3223103 3228182 ECH
Gma13g02985 13 44352975 44362735 Gma15g00385 15 3223103 3228182 ECH
Gma15g00385 15 3223103 3228182 Gma12g00576 12 4839591 4844235 PCT
Gma15g00385 15 3223103 3228182 Gma11g01282 11 10937675 10943502 PCT
Gma12g00575 12 4830178 4835229 Gma15g00385 15 3223103 3228182 PCT
Gma11g01281 11 10930163 10935018 Gma15g00385 15 3223103 3228182 PCT