Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01282 ATGGCAACGAATTCTTCTGATGTACTATCGCCGAAGCAACCTCCCTTGCCATCTCCCTTGCGTTTCTCCAAATTCTATCAGTCTAACATGAGAATCTTGATTACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAACGAGTTGGGGCAAGGATTTTACTCACATCAACATCTGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAGGCTATTGGGGCAATGTGAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGGCCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCGATTCGTGGTGAACCCTTGACAGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGACTTATCCGTCTCATGGAAGGATCCGACACTGGGCCAATCAACCTTGGAAATCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTAATTAATCCAGATGTGGAGATAAAGGTAGTGGAGAACACTCCTGATGATCCGCGACAGAGAAAACCAATTATAACAAAAGCAATGGAATTGCTTGGCTGGGAACCAAAGTGTTTGCGTGTGACTCTATCCAACGGCCACGCTTCCATCATTTCTTTCAACCCGCTTGTTTTCCACGCTCTTCATTTTCAAAACAAAGATCGAAGAAAAGCGATAAATGCCGATGCCGCGTCTGGATCGGGATTAGGGCCCTAG 1101 0.4387 MATNSSDVLSPKQPPLPSPLRFSKFYQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLTIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPEGYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGPINLGNPGEFTMLELAETVKELINPDVEIKVVENTPDDPRQRKPIITKAMELLGWEPKCLRVTLSNGHASIISFNPLVFHALHFQNKDRRKAINADAASGSGLGP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01282 366 Pfam GDP-mannose 4,6 dehydratase 33 320 IPR016040 -
Gma11g01282 366 Gene3D - 29 335 - -
Gma11g01282 366 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 2 320 - -
Gma11g01282 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 319 IPR036291 -
Gma11g01282 366 CDD UGD_SDR_e 30 328 - -
Gma11g01282 366 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 2 320 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01282 Gma-Chr11 10937675 10943502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01282 27 318 Miscellaneous Gene Families AT1G02000 22.324 6.23e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01282 K08678 - gmx:100816443 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00576 12 4839591 4844235 Gma11g01282 11 10937675 10943502 GST
Gma15g00385 15 3223103 3228182 Gma11g01282 11 10937675 10943502 PCT