Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02985 ATGCCACCATTGTGGCGAGAGTGCCTCTCATCTGCGTTCCGAACCGCCCTAGCGTGCACCATAGTGGGTTGTGTGACCCTCTATGGTCCTTCTTCCATTTGCACCCTCGTAGCATTCCCTGCATTCTCATACGTCACAGCCATTCTCATCATCATAAACGACGCCGCTTTGGGAGACGCCTTGCGTGGATGTTGGCTCGCACTCTATGCCACCTTTCAGAGCATGGGCCCCGCCATGTTGAGCTTGTGGGCTGTCGGACCAGGACGGTTCTCTAAAGCCACCAGCGCTGCGGCGGTGGCGCTGGCCGCATTTGTGGTGGTTCTTCCCTGGCCTCAGAGCACGCATTTGATAGCTAAACGTGTATCGTTGGGTCAGATAGTGCTGGTGTACGTGGTGGCTTATGCAAATGGTGTTCACACTGATCCTATCATGCACCCTATAAGCTTGGCTGCTAGCACTGCCTTAGGTGTTCTTGCTTGCGTTGTGGCATTGCTGCTTCCTTATCCGCGTCTTGCTTCCTCCCAGATGAATCAAAGCTACAAGCGATTAACCAAAAATATCTTGAAGAGATTGAAGCTTCTTGTAAAAGTGATATGCGAGGAGGACAAGATTACTGCGGTCGGATTAATGTCTCATGCCAAGTCTTTAGTAACTAAGCGAACCAAGCTCCTTTCTATCATCATTCGCTACAATGAGGGCATGCAATGGGAGAGACTTCCAATTAAAATTTTCAGATCACATTGCTTGAGCCTAATAGAGAGACTTCAAGAGGTAGATACCAATCTAAGAGGGATGGAGTTGGCTTTAGCTTGCACCAATTCATTCCCAATCAACATTCTCGACCAAGACTTTAAACATGGTCTTAATAGCCTTGAGGAGCATGTTACCCTGACCATAAAACAAGCTAAACAAAGCTTACGTGACGGTTCACTAACTGTCCCCGAATCTAATGCAAAAACCACAACCCATTTTCTCCAATCCCTTCACACCATTCCAACAACTTACCAAGAATTATCCATTTGCTTCTTCTTATTTTGCGCCAAACTCCTCCACAAGAAATCATTGACCGAACCTCCAACTTGTACTCAAGACCTACTCGTTAAGAAAAATGGAAATTCTCCGAAAGAAAAGTTGGCTAATTTGATAGCAACGTTAAGAAATACAAATCTTATGCCAGCAATTAAATTCTCTCTCTCTTTGGGCCTCTCAGTGTTCATGGGCTTAATATACAGCAAAGAAAATGGGTTCTGGGCTGGGCTTCCAGTGGCCGTGAGCTATGTTTCGGGGAGAGAAGCCACATTTAGAGCTGCAAATGTTAAGGCTCAAGGAACCGTGTTAGGAACTGTGTATGGCGTTTTGGGTTGCTTCGTATTTGAGAGATTCTTGCCCATTAGATTCTTGTCTCTACTTCCTTGGTTCATCTTCACGAGCTTCCTTCAGCGAAGTAAAATGTATGGGCCTGCTGGTGGCATTTCCGCAGTTATTGGGGCCATTCTAATTCTTGGTAGGAAAAATTTTGGGCCACCAAGTGAGTTTGCTTTAGCCAGAATAATTGAAACTTTTATTGGGCTCTCATGTTCTATTTTCGTGGATCTTATTTTCTGGCCCAAAAGAGCCTCCACCTGCTCCAAAACGGAACTCTCTCAATGCCTGGCCACACTTGGTGAGTCCATTGGGTCGTTGAGTCTCCTTGTTGCTGGCAAAACCAATTTGGAAGATAACCAAAGGAAGTTGAAAATGCAAGTTAACGAGCTTAGGAAATTTGTTGTGGAAGCAGAAATGGAACCTAACTTATGGTTTCTACCATTTAATAGTGTTTGTTATAATAAGCTTTTGGGGTCATTGTCAAGAGTGGTGGATCTCATGAGGTTTGGAGAACATGCTTTGAAGTTCCTCCAACAAGAATTCCAACGATGTGGGGCTTGTGAGAAAGAGGATGTGAACATGCTAGAGGGTGAACTTGGACACGTTAAGGACTTGATTTGCTCTTCAATAAAAAATATTGAAGAGATTTCTAGTACGAAATTTGTTGCGAAAGAGGTTGAGAAGAATAACAATTCGTGTGATCTCGAAGCAGGAAAGTCAAATTGGGGTAATAATACGTGCATGATTTCTCGTTTAGGTGAAGATGGAATTGAACAAACAATTGGCTCTTTTCTCCAACGGTCTAGAATTGTTGTTGATAACTTATATGGTGATGAAGGTGAGAACGAAATGAAGAGCCACGTTGTTCTTAGTTTGAGTGCCGTGGGATTCTGCTTGTCTGCATATCAGGAATTAATTTCAGAGGTTCAGAGAATGGCAACGGATTCTTCTAATGGTAATGGACATCACCAAACAACAACAAAGCAACCTCCTTTGCCGTCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGGTCTCACTTAGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTAATTGTTGCTGACAACTACTTCACTGGATCCAAGGACAACCTCAAAAAATGGATAGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTATTGATCGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTAAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGTTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGGGTGGCCGAGACATTGATGTTTGATTACCATAGGCAGCATGGGATTGAAATACGCattgcaagaatctttaacacatatggaccacgcatgaatattgatgatgggcgtgttgttagcaacttcattgctcaagCACTTCGGGGGGAACCATTGACAGTCCAATGTCCAGGAACACAAACTCGAAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAAACACCGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAGCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGATCCGCGACAAAGAAAACCAGACATCACAAAAGCAAAGGAATTGTTGGGCTGGGAGCCAAAGGTCAAGTTGCGTGATGGTCTTCCTCGTATGGAAGAGGATTTTCGTCTGAGGCTTGAAGTTGGCAAAAAGAATTAA 3345 0.4314 MPPLWRECLSSAFRTALACTIVGCVTLYGPSSICTLVAFPAFSYVTAILIIINDAALGDALRGCWLALYATFQSMGPAMLSLWAVGPGRFSKATSAAAVALAAFVVVLPWPQSTHLIAKRVSLGQIVLVYVVAYANGVHTDPIMHPISLAASTALGVLACVVALLLPYPRLASSQMNQSYKRLTKNILKRLKLLVKVICEEDKITAVGLMSHAKSLVTKRTKLLSIIIRYNEGMQWERLPIKIFRSHCLSLIERLQEVDTNLRGMELALACTNSFPINILDQDFKHGLNSLEEHVTLTIKQAKQSLRDGSLTVPESNAKTTTHFLQSLHTIPTTYQELSICFFLFCAKLLHKKSLTEPPTCTQDLLVKKNGNSPKEKLANLIATLRNTNLMPAIKFSLSLGLSVFMGLIYSKENGFWAGLPVAVSYVSGREATFRAANVKAQGTVLGTVYGVLGCFVFERFLPIRFLSLLPWFIFTSFLQRSKMYGPAGGISAVIGAILILGRKNFGPPSEFALARIIETFIGLSCSIFVDLIFWPKRASTCSKTELSQCLATLGESIGSLSLLVAGKTNLEDNQRKLKMQVNELRKFVVEAEMEPNLWFLPFNSVCYNKLLGSLSRVVDLMRFGEHALKFLQQEFQRCGACEKEDVNMLEGELGHVKDLICSSIKNIEEISSTKFVAKEVEKNNNSCDLEAGKSNWGNNTCMISRLGEDGIEQTIGSFLQRSRIVVDNLYGDEGENEMKSHVVLSLSAVGFCLSAYQELISEVQRMATDSSNGNGHHQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVSDLVDGLIRLMGGSNTGPINLGNPGEFTMTELAETVKELINPGVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPRMEEDFRLRLEVGKKN 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02985 1114 PANTHER F3L24.34 PROTEIN 4 767 - -
Gma13g02985 1114 Pfam GDP-mannose 4,6 dehydratase 804 1100 IPR016040 -
Gma13g02985 1114 Pfam Fusaric acid resistance protein-like 403 530 - -
Gma13g02985 1114 Gene3D - 800 1110 - -
Gma13g02985 1114 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 796 1105 IPR036291 -
Gma13g02985 1114 CDD UGD_SDR_e 801 1105 - -
Gma13g02985 1114 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 4 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02985 Gma-Chr13 44352975 44362735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02985 803 1113 Miscellaneous Gene Families AT4G00110 24.566 3.44e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02985 - - gmx:100785658 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02985 13 44352975 44362735 Gma13g02985 13 44352975 44362735 ECH
Gma13g02985 13 44352975 44362735 Gma15g00385 15 3223103 3228182 ECH
Gma13g02985 13 44352975 44362735 Gma15g00383 15 3220063 3220377 GST