Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00576 ATGGCAGGGAATTCTTCTGATGTACTGTCGCCGAAGCAACCTCCCTTGCCATCTCCCTTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATTTTGATTACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATTCGTCATGATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCGTGCCCTGCATCTCCTATTTTCTACAAATATAATCCCGTGAAGACAATAAAGACAAATGTGATTGGTACACTGAACATGCTTGGGCTTGCCAAGCGAGTTGGGGCAAGGATTTTACTCACATCAACATCTGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTGAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGGCCGCGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTGACAGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGACTTATCCGTCTCATGGAAGGATCCGACACTGGACCAATCAACCTTGGAAATCCAGGTGAATTTACAATGCTAGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAGATGTGGAGATAAAGGTAGTGGAGAACACTCCTGATGATCCGCGACAGAGAAAACCAATCATAACAAAAGCAATGGAATTGCTTGGCTGGGAACCAAAGGTTAAGCTGCGAGATGGGCTTCCTCTTATGGAAGAGGATTTTCGTTTGAGGCTTGGATTTGACAAAAAAAATTAA 1032 0.4312 MAGNSSDVLSPKQPPLPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLTIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGPINLGNPGEFTMLELAETVKELINPDVEIKVVENTPDDPRQRKPIITKAMELLGWEPKVKLRDGLPLMEEDFRLRLGFDKKN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00576 343 CDD UGD_SDR_e 30 334 - -
Gma12g00576 343 Pfam GDP-mannose 4,6 dehydratase 33 327 IPR016040 -
Gma12g00576 343 Gene3D - 29 336 - -
Gma12g00576 343 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 3 343 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gma12g00576 343 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 3 343 - -
Gma12g00576 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 334 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00576 Gma-Chr12 4839591 4844235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00576 27 342 Miscellaneous Gene Families AT1G02000 23.077 1.49e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00576 K08678 - gmx:100818771 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00576 12 4839591 4844235 Gma12g00576 12 4839591 4844235 ECH
Gma11g01281 11 10930163 10935018 Gma12g00576 12 4839591 4844235 ECH
Gma12g00576 12 4839591 4844235 Gma11g01282 11 10937675 10943502 GST
Gma15g00385 15 3223103 3228182 Gma12g00576 12 4839591 4844235 PCT