Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00347 ATGGCCTGTGAAAATGACAAAAAAGGCCACCTATTACTTGCCCTAGGGCTAGTGCTCTGCGTCACCCTGACCTTCTTCCCAAGGGTGACCGAAGGGAGGGTGCCCTTTGCATGCGACCCTAGGAACGGGCTCACGAGGGGGTTCAAGTTCTGCAACACGCACGTGCCGATCCACGTGAGGGTGCAGGACCTCATAGCGAGGCTCACATTGCCGGAAAAAATTAGGCTCGTCGTTAACAATGCCATCGCCGTGCCCAGGCTCGGCATCCAAGGATACGAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAATGTGGGCCCCGGCACCAAGTTCGGTGGGGCCTTCCCTGGCGCCACCATGTTCCCTCAAGTCATCTCAACCGCTGCTTCGTTTAATCAGTCGCTGTGGCAGGAAATTGGACGGGTGGTGTCTGATGAAGCAAGAGCAATGTACAACGGTGGACAGGCTGGTTTGACGTATTGGAGTCCTAATGTGAACATTTTCCGTGACCCACGGTGGGGCCGTGGCCAAGAGACTCCCGGCGAGGACCCGACATTGGCCGCAAAATACGCCGCCAGCTATGTCAAAGGACTCCAAGGCGATGGTGCCGGAAATCGCCTCAAGGTTGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAATTGGAATGGTGTGGACAGGTTTCATTTCAACGCCAAGGTGAGTAAACAGGATTTGGAGGACACTTATGATGTACCATTTAAAGCGTGCGTGTTGGAAGGGCAAGTGGCGAGTGTGATGTGCTCCTACAATCAGGTGAATGGCAAGCCCACGTGTGCTGACCCTGATCTCCTTCGCAACACTATTCGTGGCCAATGGGGCCTCAATGGGTATATTGTTTCGGACTGTGACTCGGTTGGAGTTTTCTTTGACAATCAACACTACACAAGAACACCTGAGGAGGCAGCTGCTGAGGCCATCAAAGCTGGCCTGGACTTGGATTGTGGCCCATTCTTGGCTATCCACACTGATTCTGCCATTAGGAAGGGACTCATTTCAGAAAATGATCTTAACCTTGCATTGGCCAACCTTATTACAGTCCAAATGAGATTGGGTATGTTCGACGGTGAACCATCAACCCAACCATTCGGAAACTTGGGCCCAAGAGATGTTTGCACCCCAGCCCATCAACAATTGGCCCTTGAAGCAGCTAGAGAGAGTATAGTCTTGCTACAAAATAAAGGAAACTCCCTACCACTATCCCCTTCAAGACTTCGTATCGTAGGAGTCATTGGACCCAATACGGATGCTACCGTTACAATGATCGGAAACTATGCTGGTGTGGCATGTGGTTATACCACCCCTTTGCAAGGAATTGCAAGGTATGCAAAGACGGCTCATCAAGTAGGTTGTAGGGGTGTCGCTTGCAGGGGAAATGAACTATTTGGTGCCGCAGAGATCATAGCTAGGCAAGTTGATGCGACTGTTCTAGTAATGGGCCTTGACCAAACCATAGAAGCGGAAACAAGAGATAGGGTTGGGCTTCTCTTACCAGGCCTTCAGCAAGAACTTGTGACTAGGGTGGCCAGGGCCGCTAAGGGCCCCGTTATCTTGGTCATCATGTCTGGTGGCCCGGTTGATGTTTCGTTTGCTAAAAATAACCCTAAGATTAGTGCCATTTTGTGGGTTGGTTATCCTGGTCAAGCTGGGGGAACTGCCATTGCTGATGTGATCTTTGGTGCAACCAACCCAGGAGGAAGGTTACCCATGACATGGTACCCACAAGGGTATTTGGCTAAAGTGCCGATGACAAACATGGACATGCGTCCAAACCCAGCAACAGGATACCCAGGAAGAACCTACAGATTCTACAAAGGACCAGTGGTGTTCCCATTTGGACATGGACTAAGTTACTCAAGATTCAGCCAAAGCTTAGCACTTGCTCCAAAACAGGTCTCGGTGCAAATACTGAGCCTCCAAGCCTTGACAAACTCAACCCTCTCAAGCAAAGCAGTGAAGGTGAGCCATGCCAATTGTGACGACTCATTGGAGACGGAATTCCACGTTGACGTGAAAAACGAAGGCTCAATGGATGGGACCCACACCCTTCTCATATTCTCGAAACCACCCCCGGGAAAATGGTCACAAATTAAACAGTTGGTGACCTTCCACAAGACCCATGTTCCTGCTGGCTCCAAGCAACGACTTAAGGTTAATGTTCATTCCTGCAAACACTTGTCCGTTGTGGACCAGTTTGGGGTTCGAAGAATCCCAACCGGTGAACATGAACTCCACATTGGTGATCTCAAACATTCAATTAATGTCCAAACTACGCATTGA 2325 0.5041 MACENDKKGHLLLALGLVLCVTLTFFPRVTEGRVPFACDPRNGLTRGFKFCNTHVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVISTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVKGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGQVASVMCSYNQVNGKPTCADPDLLRNTIRGQWGLNGYIVSDCDSVGVFFDNQHYTRTPEEAAAEAIKAGLDLDCGPFLAIHTDSAIRKGLISENDLNLALANLITVQMRLGMFDGEPSTQPFGNLGPRDVCTPAHQQLALEAARESIVLLQNKGNSLPLSPSRLRIVGVIGPNTDATVTMIGNYAGVACGYTTPLQGIARYAKTAHQVGCRGVACRGNELFGAAEIIARQVDATVLVMGLDQTIEAETRDRVGLLLPGLQQELVTRVARAAKGPVILVIMSGGPVDVSFAKNNPKISAILWVGYPGQAGGTAIADVIFGATNPGGRLPMTWYPQGYLAKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLSYSRFSQSLALAPKQVSVQILSLQALTNSTLSSKAVKVSHANCDDSLETEFHVDVKNEGSMDGTHTLLIFSKPPPGKWSQIKQLVTFHKTHVPAGSKQRLKVNVHSCKHLSVVDQFGVRRIPTGEHELHIGDLKHSINVQTTH 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00347 774 PANTHER BETA-D-XYLOSIDASE 1 17 773 - -
Gma09g00347 774 SUPERFAMILY (Trans)glycosidases 49 402 IPR017853 -
Gma09g00347 774 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 636 IPR036881 GO:0004553|GO:0005975
Gma09g00347 774 Pfam Glycosyl hydrolase family 3 N terminal domain 115 350 IPR001764 GO:0004553|GO:0005975
Gma09g00347 774 PRINTS Glycosyl hydrolase family 3 signature 121 140 IPR001764 GO:0004553|GO:0005975
Gma09g00347 774 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Gma09g00347 774 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Gma09g00347 774 Gene3D Immunoglobulins 657 774 IPR013783 -
Gma09g00347 774 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 633 IPR002772 GO:0004553|GO:0005975
Gma09g00347 774 Gene3D - 60 377 IPR036962 GO:0004553|GO:0005975
Gma09g00347 774 SMART Fn3_like_2 696 765 IPR026891 -
Gma09g00347 774 Gene3D - 389 634 IPR036881 GO:0004553|GO:0005975
Gma09g00347 774 Pfam Fibronectin type III-like domain 701 763 IPR026891 -
Gma09g00347 774 PANTHER SUGAR HYDROLASE-RELATED 17 773 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00347 Gma-Chr9 3275571 3282704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00347 1 771 Glycoside Hydrolase AT5G49360 71.630 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00347 - - gmx:100812823 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00347 09 3275571 3282704 Gma09g00347 09 3275571 3282704 ECH
Gma19g02415 19 52638712 52640453 Gma09g00347 09 3275571 3282704 GST
Gma15g01341 15 11950244 11957019 Gma09g00347 09 3275571 3282704 GST
Gma09g00347 09 3275571 3282704 Gma07g00516 07 4960125 4961794 PCT
Gma09g00347 09 3275571 3282704 Gma16g00215 16 2341272 2344151 PCT
Gma07g00516 07 4960125 4961794 Gma09g00347 09 3275571 3282704 PCT
Gma16g00215 16 2341272 2344151 Gma09g00347 09 3275571 3282704 PCT