Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02415 atggttttagacaccggaagcgacgtcgtttggctccaatgcgccccttgccgcaaatgctacacccaagccgaccccgtttttgaccccaccaaatccCGAACCTACGCCGGAATCCCCTGCGGGGCCCCTCTCTGCCGCCGCTTGGACTCCCCCGGCTGCAACAACAAGAACAAGGTTTGCCAGTACCAGGTTTCCTACGGCGACGGCTCCTTCACATTCGGCGATTTCTCCACCGAAACGCTCACGTTTCGAAGAACCAGAGTCACGCGCGTCGCGCTCGGCTGCGGCCACGACAATGAAGGACTCTTTATCGGCGCTGCTGGGCTTTTGGGCCTGGGCCGTGGGAGGTTATCGTTTCCGGTCCAGACCGGTCGCCGGTTCAACCAGAAATTCTCTTACTGCCTCGTCGACCGTTCCGCTTCGGCCAAACCCTCCTCTGTCGTTTTCGGAGATTCCGCTGTTTCCCGAACCGCGCGCTTCACTCCTCTTATAAAAAACCCCAAGCTCGACACCTTCTACTACCTCGAGCTCCTCGGGATCAGCGTCGGCGGCTCGCCGGTGCGCGGCCTCTCCGCCTCGCTCTTCCGCCTCGACGCAGCGGGAAACGGCGGCGTCATCATCGACTCGGGCACCTCCGTGACCCGGCTCACCCGACCCGCCTACATTGCCCTCCGAGACGCCTTCCGCGTCGGGGCCTCGCATCTGAAGCGTGCAGCGGAGTTCTCGCTCTTCGACACGTGTTTCGACCTGTCCGGGCTCACGGAGGTGAAGGTGCCCACGGTGGTGCTGCATTTCCGAGGTGCCGACGTGTCATTGCCGGCGACGAATTACTTGATTCCGGTGGATAACAGTGGGAGCTTCTGCTTCGCGTTTGCGGGAACTATGAGCGGTTTGTCCATAATTGGTAACATCCAACAACAAGGGTTCCGGGTCTCCTTCGACCTTGCGGGTTCTCGGGTCGGGTTTGCCCCTAGAGGTTGCGTTTGA 990 0.5495 MVLDTGSDVVWLQCAPCRKCYTQADPVFDPTKSRTYAGIPCGAPLCRRLDSPGCNNKNKVCQYQVSYGDGSFTFGDFSTETLTFRRTRVTRVALGCGHDNEGLFIGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSASAKPSSVVFGDSAVSRTARFTPLIKNPKLDTFYYLELLGISVGGSPVRGLSASLFRLDAAGNGGVIIDSGTSVTRLTRPAYIALRDAFRVGASHLKRAAEFSLFDTCFDLSGLTEVKVPTVVLHFRGADVSLPATNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSFDLAGSRVGFAPRGCV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02415 329 Gene3D Acid Proteases 150 329 IPR021109 -
Gma19g02415 329 ProSiteProfiles Peptidase family A1 domain profile. 1 324 IPR033121 -
Gma19g02415 329 SUPERFAMILY Acid proteases 1 328 IPR021109 -
Gma19g02415 329 PANTHER ASPARTYL PROTEASES 1 328 IPR001461 GO:0004190|GO:0006508
Gma19g02415 329 Gene3D Acid Proteases 1 149 IPR021109 -
Gma19g02415 329 Pfam Xylanase inhibitor N-terminal 1 152 IPR032861 -
Gma19g02415 329 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 1 328 - -
Gma19g02415 329 Pfam Xylanase inhibitor C-terminal 174 324 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02415 Gma-Chr19 52638712 52640453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02415 3 328 Miscellaneous Gene Families AT1G77480 27.855 7.50e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02415 K22683 - gmx:100794269 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02415 19 52638712 52640453 Gma19g02415 19 52638712 52640453 ECH
Gma19g02415 19 52638712 52640453 Gma09g00347 09 3275571 3282704 GST
Gma19g02415 19 52638712 52640453 Gma07g00516 07 4960125 4961794 PCT
Gma19g02415 19 52638712 52640453 Gma16g00215 16 2341272 2344151 PCT
Gma07g00516 07 4960125 4961794 Gma19g02415 19 52638712 52640453 PCT
Gma16g00215 16 2341272 2344151 Gma19g02415 19 52638712 52640453 PCT