Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01341 ATGGCTTGTGAAAATGACAACAACAACAAAGGCCTATTACTTGCCCTAGGGCTAGTACTTTGTGTCACCCTGTCCTTCTTCCCAAGGGTCACAGAAGGGAGGGTGCCCTTTGCATGCGACCCTAGGAACGGTCTCACGAGGGGTTTCAAGTTTTGCAACACGCACGTGCCAATCCACGTGAGGGTGCAGGACCTCATTGCGAGGCTCACATTGCCGGAGAAGATCAGGCTCGTGGTCAACAATGCCATCGCCGTGCCCAGGCTCGGCATCCAAGGCTACGAGTGGTGGTCCGAGGCTCTCCACGGCGTCTCCAATGTGGGCCCCGGCACCAAGTTCGGCGGAGCCTTCCCCGGCGCCACCATGTTCCCTCAGGTCATCTCGACCGCTGCTTCGTTCAATCAGTCGCTGTGGCAGGAAATTGGACGGGTGGTGTCTGATGAAGCAAGAGCAATGTACAACGGTGGACAGGCTGGTTTGACGTATTGGAGTCCTAATGTGAACATTTTCCGTGACCCACGGTGGGGCCGTGGCCAAGAGACTCCCGGCGAGGACCCAACACTGGCCGCGAAATACGCCGCCAGCTATGTCAAAGGACTTCAAGGCGACAGTGCCGGAAACCACCTCAAGGTTGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAACTGGAATGGTGTGGACAGGTTTCATTTCAACGCCAAGGTGAGTAAACAGGATTTGGAGGATACTTATGATGTACCATTTAAAGCGTGCGTGTTGGAAGGGCAAGTGGCGAGTGTGATGTGCTCCTACAATCAGGTGAATGGCAAGCCCACGTGTGCTGACCCAGATCTCCTTCGCAACACTATTCGTGGCCAATGGCGCCTCAATGGGTATATTGTCTCAGACTGTGATTCAGTTGGAGTTTTCTTTGACAACCAACACTACACAAAAACACCTGAAGAGGCAGCTGCTGAGGCCATTAAAGCGGGTCTAGACTTGGATTGTGGCCCATTTTTGGCTATCCACACTGATTCTGCCATTAGGAAAGGGCTTATTTCCGAAAATGATCTTAACCTTGCCTTGGCCAACCTTATTTCGGTCCAAATGAGATTGGGTATGTTCGACGGCGAACCGTCAACCCAACCATACGGAAACCTAGGCCCAAGAGATGTGTGCACCTCGGCCCATCAACAATTGGCCCTTGAAGCAGCTAGAGAGAGTATAGTCTTACTACAAAACAAAGGAAACTCCCTACCATTATCCCCTTCAAGACTTCGTACTATAGGTGTCGTTGGACCCAATGCTGATGCTACCGTTACAATGATTGGGAACTATGCTGGTGTGGCATGTGGTTATACCACTCCTTTGCAAGGAATTGCGAGGTATGTGAAGACGGCTCATCAAGTGGGGTGTAGGGGTGTGGCTTGTAGGGGAAATGAACTATTTGGGGCTGCAGAGACCATAGCTAGGCAAGCTGATGCGATTGTTTTGGTAATGGGCCTTGACCAGACTGTAGAAGCGGAAACAAGAGATAGAGTTGGGCTTCTCTTACCGGGCCTTCAACAAGAACTTGTGACAAGGGTGGCTAGGGCCGCTAAGGGCCCAGTTATCTTGCTCATCATGTCTGGTGGCCCAGTTGATATCTCGTTTGCCAAAAATGACCCCAAGATTAGTGCCATTTTGTGGGTTGGTTATCCCGGGCAAGCTGGGGGAACTGCCATTGCTGATGTAATCTTTGGTACAACTAACCCAGGAGGAAGGTTACCCATGACATGGTACCCACAAGGTTACTTGGCCAAAGTGCCCATGACAAACATGGACATGCGTCCAAACCCAACAACAGGGTACCCAGGAAGAACCTATAGATTCTACAAAGGTCCTGTAGTGTTCCCATTCGGACATGGCCTAAGTTACTCAAGATTCAGCCACAGCTTAGCACTTGCCCCCAAACAGGTCTCAGTGCCCATAATGAGCCTCCAAGCCTTGACAAACTCAACCCTCTCAAGCAAAGCAGTTAAGGTGAGCCATGCCAATTGTGATGACTCATTGGAGATGGAATTCCACGTTGATGTGAAAAACGAAGGCTCAATGGATGGGACCCACACCCTTCTCATATTCTCACAACCACCCCATGGAAAATGGTCGCAAATTAAACAATTGGTGGGCTTCCACAAGACCCATGTTCTTGCTGGCTCAAAGCAACGAGTCAAGGTTGGTGTTCATGTGTGCAAACACTTATCCGTTGTGGACCAGTTCGGGGTTCGAAGAATCCCAACCGGTGAACATGAACTCCACATTGGTGATGTCAAACATTCAATTTCTGTTCAAACTACGCATTAA 2328 0.5026 MACENDNNNKGLLLALGLVLCVTLSFFPRVTEGRVPFACDPRNGLTRGFKFCNTHVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVISTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVKGLQGDSAGNHLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGQVASVMCSYNQVNGKPTCADPDLLRNTIRGQWRLNGYIVSDCDSVGVFFDNQHYTKTPEEAAAEAIKAGLDLDCGPFLAIHTDSAIRKGLISENDLNLALANLISVQMRLGMFDGEPSTQPYGNLGPRDVCTSAHQQLALEAARESIVLLQNKGNSLPLSPSRLRTIGVVGPNADATVTMIGNYAGVACGYTTPLQGIARYVKTAHQVGCRGVACRGNELFGAAETIARQADAIVLVMGLDQTVEAETRDRVGLLLPGLQQELVTRVARAAKGPVILLIMSGGPVDISFAKNDPKISAILWVGYPGQAGGTAIADVIFGTTNPGGRLPMTWYPQGYLAKVPMTNMDMRPNPTTGYPGRTYRFYKGPVVFPFGHGLSYSRFSHSLALAPKQVSVPIMSLQALTNSTLSSKAVKVSHANCDDSLEMEFHVDVKNEGSMDGTHTLLIFSQPPHGKWSQIKQLVGFHKTHVLAGSKQRVKVGVHVCKHLSVVDQFGVRRIPTGEHELHIGDVKHSISVQTTH 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01341 775 SMART Fn3_like_2 697 766 IPR026891 -
Gma15g01341 775 Gene3D - 390 635 IPR036881 GO:0004553|GO:0005975
Gma15g01341 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 404 637 IPR036881 GO:0004553|GO:0005975
Gma15g01341 775 Pfam Glycosyl hydrolase family 3 N terminal domain 116 333 IPR001764 GO:0004553|GO:0005975
Gma15g01341 775 Gene3D - 61 378 IPR036962 GO:0004553|GO:0005975
Gma15g01341 775 PANTHER SUGAR HYDROLASE-RELATED 19 774 IPR044993 GO:0009044|GO:0045493
Gma15g01341 775 Pfam Fibronectin type III-like domain 701 764 IPR026891 -
Gma15g01341 775 Gene3D Immunoglobulins 658 775 IPR013783 -
Gma15g01341 775 SUPERFAMILY (Trans)glycosidases 50 403 IPR017853 -
Gma15g01341 775 PANTHER BETA-D-XYLOSIDASE 1 19 774 - -
Gma15g01341 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 404 634 IPR002772 GO:0004553|GO:0005975
Gma15g01341 775 PRINTS Glycosyl hydrolase family 3 signature 122 141 IPR001764 GO:0004553|GO:0005975
Gma15g01341 775 PRINTS Glycosyl hydrolase family 3 signature 210 226 IPR001764 GO:0004553|GO:0005975
Gma15g01341 775 PRINTS Glycosyl hydrolase family 3 signature 284 302 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01341 Gma-Chr15 11950244 11957019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01341 9 772 Glycoside Hydrolase AT5G49360 71.114 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01341 - - gmx:100805839 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01341 15 11950244 11957019 Gma15g01341 15 11950244 11957019 ECH
Gma15g01341 15 11950244 11957019 Gma09g00347 09 3275571 3282704 GST