Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00516 atggaagagaaactaaagtacccctgtctctcttccttgttaaccctcttcctctgcatctccgccacttccactaacccacacaactcccaaacccaaacccttctcctccataccctccctgacccacccacactctcatggcccgaatccgccaccgtagaacccgacccggaacccaccacatccctctcccttcaccacatagacgcactctccttcaacaaaaccccttcccaactcttccacctgagactcgaacgcgatgccgcaagggtcaaaaccctcacccacttagccgcagccacaaacaaaacccgacccgccaaccccgggtcgggtttcagcagctccgtggtatcgggtctctcccaaggcagcggcgagtactttacgcgcctgggcgtgggaactcctccgaagtacctctacatggtcctcgacaccggaagcgacgtcgtttggctccaatgcaagccctgcaccaaatgctactcccaaaccgaccaaatcttcgacccatcaaaatccaaatccttcgccggaatcccctgctactcccCTCTCTGCCGCCGCCTCGACTCCCCCGGCTGCAGCCTAAAAAACAACCTTTGCCAGTACCAGGTTTCTTACGGTGACGGCTCCTTCACATTCGGAGATTTCTCAACGGAAACTCTCACGTTCCGACGCGCTGCAGTCCCGCGCGTGGCCATCGGCTGCGGCCACGACAACGAGGGACTCTTCGTGGGCGCCGCAGGTTTATTGGGCCTCGGTCGCGGCGGCTTGTCTTTTCCTACCCAGACCGGAACCCGGTTCAATAACAAATTCTCTTATTGCCTAACCGACCGAACCGCTTCCGCTAAACCGTCTTCCATTGTGTTCGGTGACTCCGCTGTTTCTCGAACCGCCCGGTTCACTCCTTTAGTTAAAAACCCTAAGCTTGATACATTTTATTATGTTGAGCTTCTTGGGATCAGCGTTGGCGGCGCGCCGGTTCGGGGAATTTCGGCTTCGTTCTTTCGGCTCGACTCTACCGGGAACGGTGGGGTGATTATTGACTCGGGGACTTCCGTCACGCGCCTCACGCGCCCTGCTTACGTGTCATTAAGAGACGCTTTTCGGGTCGGGGCTTCGCATTTGAAGCGCGCGCCTGAGTTCTCGCTTTTTGACACGTGCTATGATCTTTCGGGGTTGTCGGAGGTTAAGGTTCCGACCGTGGTTCTGCATTTTCGGGGCGCTGACGTGTCGTTGCCGGCGGCGAATTATCTCGTTCCGGTGGATAATAGCGGGAGCTTTTGCTTTGCGTTCGCCGGAACGATGAGTGGGTTGTCTATTATCGGGAACATTCAGCAGCAAGGGTTTCGGGTCGTGTTTGACTTGGCGGGTTCTCGGGTCGGGTTTGCCCCAAGAGGATGCGCGTGA 1422 0.3411 MEEKLKYPCLSSLLTLFLCISATSTNPHNSQTQTLLLHTLPDPPTLSWPESATVEPDPEPTTSLSLHHIDALSFNKTPSQLFHLRLERDAARVKTLTHLAAATNKTRPANPGSGFSSSVVSGLSQGSGEYFTRLGVGTPPKYLYMVLDTGSDVVWLQCKPCTKCYSQTDQIFDPSKSKSFAGIPCYSPLCRRLDSPGCSLKNNLCQYQVSYGDGSFTFGDFSTETLTFRRAAVPRVAIGCGHDNEGLFVGAAGLLGLGRGGLSFPTQTGTRFNNKFSYCLTDRTASAKPSSIVFGDSAVSRTARFTPLVKNPKLDTFYYVELLGISVGGAPVRGISASFFRLDSTGNGGVIIDSGTSVTRLTRPAYVSLRDAFRVGASHLKRAPEFSLFDTCYDLSGLSEVKVPTVVLHFRGADVSLPAANYLVPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFAPRGCA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00516 473 Gene3D Acid Proteases 294 473 IPR021109 -
Gma07g00516 473 Gene3D Acid Proteases 112 293 IPR021109 -
Gma07g00516 473 ProSiteProfiles Peptidase family A1 domain profile. 130 468 IPR033121 -
Gma07g00516 473 PRINTS Pepsin (A1) aspartic protease family signature 136 156 IPR001461 GO:0004190|GO:0006508
Gma07g00516 473 PRINTS Pepsin (A1) aspartic protease family signature 350 361 IPR001461 GO:0004190|GO:0006508
Gma07g00516 473 PRINTS Pepsin (A1) aspartic protease family signature 444 459 IPR001461 GO:0004190|GO:0006508
Gma07g00516 473 SUPERFAMILY Acid proteases 123 472 IPR021109 -
Gma07g00516 473 Pfam Xylanase inhibitor C-terminal 318 468 IPR032799 -
Gma07g00516 473 CDD cnd41_like 129 472 IPR033873 -
Gma07g00516 473 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 28 472 - -
Gma07g00516 473 PANTHER ASPARTYL PROTEASES 28 472 IPR001461 GO:0004190|GO:0006508
Gma07g00516 473 Pfam Xylanase inhibitor N-terminal 130 296 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00516 Gma-Chr7 4960125 4961794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00516 120 472 Miscellaneous Gene Families AT1G77480 27.720 6.42e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00516 K22683 - gmx:100791511 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00516 07 4960125 4961794 Gma07g00516 07 4960125 4961794 ECH
Gma07g00516 07 4960125 4961794 Gma16g00215 16 2341272 2344151 GST
Gma19g02415 19 52638712 52640453 Gma07g00516 07 4960125 4961794 PCT
Gma09g00347 09 3275571 3282704 Gma07g00516 07 4960125 4961794 PCT
Gma07g00516 07 4960125 4961794 Gma19g02415 19 52638712 52640453 PCT
Gma07g00516 07 4960125 4961794 Gma09g00347 09 3275571 3282704 PCT