Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00164 ATGAAAACCCACAAAGACACACGCTTTGCCCAGCTGCTTCCAGCTCATGTTGCAGATATAACGTGCATGGACCCTAGCCTGCCGCCCGTGGTGGCCGAGAAGGTATGTAAAACGGCGCGTTTGATTGGCTTCGTCTTACAAAACGGCGTATCTAAAAGCAAGGTGGTGCATGACGTGAACGTCATGATGAAACGAGGGAAGAACCTAGGGAAGTCGCTGAATAACGTGATGGAGCGCCACCACGAAGCATTGACGTGCCGATCACGCGACGCGCACACGTCCTTCGTTTCCCCTATGGCTATGGAGTACCAGTTCAGCTGCAGCGGGAGTCCACCCCGCCCATCTCAGGCTCTCTCCCACGTGCGCAAGCGGAGGGTGTTAAACTCTCCTATGTATAATAGGCACAGCCATAGCAGTAACACTAACTCCCCTCGACCTGGACGACGCGAAAGCGAAACAAAAGCATGCGGACACAGGATCAATGTCAACGTTAAACTGTGTCGCGGCGATGACATTAGAGCTTCGGCGTTGGTCGGCGTGAGTTCGGCTTCGGACAATCACACCAGTCAGTGTAGTCCAATGTCAACGCGGAGGAAGGTGACAGGGTCCGGTTCCACGTTAAACGACGACGCAGGGCAGAAGGAGTACCGGGTGGACGAGGCAGCCGAGGAGTTCATAGAAAAGTTTTATAGAGAGCTGAGGTTGCAGAAATGGCTGGATCACTATTGCTG 731 0.5376 MKTHKDTRFAQLLPAHVADITCMDPSLPPVVAEKVCKTARLIGFVLQNGVSKSKVVHDVNVMMKRGKNLGKSLNNVMERHHEALTCRSRDAHTSFVSPMAMEYQFSCSGSPPRPSQALSHVRKRRVLNSPMYNRHSHSSNTNSPRPGRRESETKACGHRINVNVKLCRGDDIRASALVGVSSASDNHTSQCSPMSTRRKVTGSGSTLNDDAGQKEYRVDEAAEEFIEKFYRELRLQKWLDHYC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00164 243 MobiDBLite consensus disorder prediction 182 211 - -
Bva10g00164 243 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 23 242 - -
Bva10g00164 243 MobiDBLite consensus disorder prediction 127 155 - -
Bva10g00164 243 PANTHER DUF761 DOMAIN PROTEIN 23 242 - -
Bva10g00164 243 MobiDBLite consensus disorder prediction 131 146 - -
Bva10g00164 243 MobiDBLite consensus disorder prediction 182 210 - -
Bva10g00164 243 Pfam Cotton fibre expressed protein 218 237 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00164 Bva-Chr10 3116961 3117692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00164 - - lang:109327860 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00164 10 3116961 3117692 Bva10g00164 10 3116961 3117692 ECH
Bva03g00555 03 3231831 3232780 Bva10g00164 10 3116961 3117692 ECH
Bva04g00715 04 4712871 4713810 Bva10g00164 10 3116961 3117692 ECH
Bva08g02197 08 14424659 14425477 Bva10g00164 10 3116961 3117692 ECH
Bva02g02364 02 23151364 23152278 Bva10g00164 10 3116961 3117692 ECH