Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00555 atggaaattgaaaaaagtcCACCGGTGGTAGCAAAGAAGCTATGGAACATAGTACGTATAGTGTTTTTCATGTTAAGAAAGGGCATAGCCAAGAGCAAGATCATGGTAGAGTTCCATTTGATGCTCAAGCGTGGCAAGCTCGCCGGCAAGGCCATAGCCAACAACCTCACGATCCACCACCACGCGGCGGCCTTCACGTGCCGCTCGCATGACGCCATTTCCTTCGTCTCTCCGCGTGACTACGAATTCAGCTGCAGCAATAGCCCCGCCTACCCGTTCCACCACCTGAAGAAACGCAAGCACGGCCACTTCGGTAGCCGGTTTTCCAAGTCGTACCAATACGACGACGTTGCAACGGTGAACGCCGTTCAGAAGGTACTCGAGATGCTGAACAATGACGTGGTGGAGGCTTCGCCGTTGGTGACATTGCCGGGGTTTGGGAAAAGCCCAATGGGGAGGCAACTGAGGATCACCGACTCGCCGTTCCCGTTGATGGACGACGGAGATAGCGCGCAAGTGGATAGGGCAGCTGAGGAATTTATTAACAAGTTCTATAAAGACCTCAACTTGCAAAAACGAATGGCTGCACTTGAATCGCCTTACCAAAATAACATGTGGGACAGACGGTG 629 0.5135 MVEFHLMLKRGKLAGKAIANNLTIHHHAAAFTCRSHDAISFVSPRDYEFSCSNSPAYPFHHLKKRKHGHFGSRFSKSYQYDDVATVNAVQKVLEMLNNDVVEASPLVTLPGFGKSPMGRQLRITDSPFPLMDDGDSAQVDRAAEEFINKFYKDLNLQKRMAALESPYQNNMWDRR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00555 175 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 169 - -
Bva03g00555 175 Pfam Cotton fibre expressed protein 138 163 IPR008480 -
Bva03g00555 175 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00555 Bva-Chr3 3231831 3232780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00555 - - qsu:112027219 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00555 03 3231831 3232780 Bva03g00555 03 3231831 3232780 BWGD
Bva03g00555 03 3231831 3232780 Bva08g02197 08 14424659 14425477 ECH
Bva03g00555 03 3231831 3232780 Bva02g02364 02 23151364 23152278 ECH
Bva03g00555 03 3231831 3232780 Bva10g00164 10 3116961 3117692 ECH
Bva03g00555 03 3231831 3232780 Bva03g00555 03 3231831 3232780 ECH