Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02197 ATGGAAAGCAATCTACCAGTAATAGCCAAGAGGGTGTGGAGAATAGTCCGTGTTGTCTTCTTCATGTTGAGAAAAGGCATATCCaaaggtaaaataataatgagcCTCAACATGATGATGCTCAAACGCCGCCGTAAGCTCGCTGGCAAAGTCATTAGCAACCTCATGTTCCACCACCACCACGGTGGCTCCACCTCAAGCCGCCGCTCTCGTGACTCGAGCATAACATTCTCGGCACCACGTGAGTACGAGTTTAGCTGCAGCAACACACCCAACAACTACTTCTTCCCCATCACCAAGCGCAACCGCAACAACAATCACTTCTTTGCGTGTGCTCACGCTCCAGCCACGCAGGATGATGAGGTGGTTACAGTTAATGCAGTTAAGGCGGTGCTGGATATGCTAAATAATGAGGTGATGGTAGAGTCGTCACCTGCACTTCCCGGGTTCGGAAAGAGTCCAATGGTCAAGCAATTGAGGGTAACAGACTCGCCGTTCCCGCTGCAAAACACCGACGACGACAAGGACCACCATGTGGACAAGGCTGCTGAAGAGTTTATAAAGAGGTTTTACAGGCAGTTGAAGAACCAGGATTA 596 0.4866 MESNLPVIAKRVWRIVRVVFFMLRKGISKGKIIMSLNMMMLKRRRKLAGKVISNLMFHHHHGGSTSSRRSRDSSITFSAPREYEFSCSNTPNNYFFPITKRNRNNNHFFACAHAPATQDDEVVTVNAVKAVLDMLNNEVMVESSPALPGFGKSPMVKQLRVTDSPFPLQNTDDDKDHHVDKAAEEFIKRFYRQLKNQD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02197 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 197 - -
Bva08g02197 198 Pfam Cotton fibre expressed protein 178 197 IPR008480 -
Bva08g02197 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02197 Bva-Chr8 14424659 14425477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02197 - - gmx:100802625 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02197 08 14424659 14425477 Bva02g02364 02 23151364 23152278 BWGD
Bva08g02197 08 14424659 14425477 Bva02g02364 02 23151364 23152278 ECH
Bva03g00555 03 3231831 3232780 Bva08g02197 08 14424659 14425477 ECH
Bva04g00715 04 4712871 4713810 Bva08g02197 08 14424659 14425477 ECH
Bva08g02197 08 14424659 14425477 Bva08g02197 08 14424659 14425477 ECH
Bva08g02197 08 14424659 14425477 Bva10g00164 10 3116961 3117692 ECH