Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02364 ATGGAAAGCAATCTACCAGTAATAGCCAAGAGGGTGTGGAGCATAGTCCGTGTGGTCTTCTTCATGTTGAGAAAAGGCATCTCAAAGGGTAAACTAATGATGGACCTCAACATGATGCTCAAACGCCGCAGCAAGCTCGCCGGTAAAGCCATTAGCAACCTCATGTTCCACTACCACCACCATCACCAGAACGGTGGCTCCACCTCAAGCCGTCGCGactcaaacataaaattctcCGCACCGCGGGAGTACGAGTTTAGCTGCAGCAACACTCCCAACAACTACTCCTTTCCCATCAGCAAGCGCAGCCGCAACAACAACCACTTTTTCACGTGTGCTCACGCGCCACCCACCCAGGATGATGAGGTGGTTACGGTTAAGGCGGTATTGGAGATGCTAAATAATGACGTCATGGTAGAGGCGTCGCCGGTGCTTCCAGGGTTCGGAAGGAGCCCGATGGTGAGGCAACTGAGGGTAACAGACTCGCCGTTCCCACTGCAAAACGCCGACGACGACAAAGACCACCAAGTGGACAAGGCTGCGGAAGAGTTTATCAAGAGGTTTTATAGGCAGTTGAAGAACCAGGATTG 590 0.5119 MESNLPVIAKRVWSIVRVVFFMLRKGISKGKLMMDLNMMLKRRSKLAGKAISNLMFHYHHHHQNGGSTSSRRDSNIKFSAPREYEFSCSNTPNNYSFPISKRSRNNNHFFTCAHAPPTQDDEVVTVKAVLEMLNNDVMVEASPVLPGFGRSPMVRQLRVTDSPFPLQNADDDKDHQVDKAAEEFIKRFYRQLKNQD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02364 196 Pfam Cotton fibre expressed protein 175 195 IPR008480 -
Bva02g02364 196 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 195 - -
Bva02g02364 196 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02364 Bva-Chr2 23151364 23152278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02364 - - gsj:114386903 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02197 08 14424659 14425477 Bva02g02364 02 23151364 23152278 BWGD
Bva08g02197 08 14424659 14425477 Bva02g02364 02 23151364 23152278 ECH
Bva03g00555 03 3231831 3232780 Bva02g02364 02 23151364 23152278 ECH
Bva04g00715 04 4712871 4713810 Bva02g02364 02 23151364 23152278 ECH
Bva02g02364 02 23151364 23152278 Bva02g02364 02 23151364 23152278 ECH
Bva02g02364 02 23151364 23152278 Bva10g00164 10 3116961 3117692 ECH