Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00715 ATGGAAATTGAACCAAATCCACCGGTGGTATCAAAGAAGCTATGGAACGTAATACGCATAATGTTTCTCATGTTGCGGAAAGGTATAGCCAAGAGAAAGATAATGGCAGAGTTCCATTTGATGCTCAAACGTGCCGGCAAGGCAATAGCCGACAACCCCATGCTTCACCACCACTACGCAGCCTTCACGTGCCGCTCAAACGACGCCCCTTCCTCCTTCATCTCTCCACGAGAGTACGAGTTCAGCTGCAGCAACAGCCCCGCCTTCCCGTTCCACCACGTGAAACGCAAGCACAACCACTTTGGCAGTAGCCGTTTTTCGAAGTCGTACCAATACGACGACGTTGCGACCGTGAATGCCGTCCAGAAGGTACTGGAGATGCTGAACCACGACAAGGTGGAGGCTTCGCCGTCGGTGACATTGCCGGGGTTTGGGAAAAGCCCGATTGGGAGGCAACTCAGGGTCACCGACTCGCCGTTCCCGTTGAAGGATGACGGGGACAGCAGAGTGGATAAGGCGGCTGAGGAATTTATTAACAGGTTCTATAAAGACCTCAGCTCGCAAAAACGAATGGCTGCGCTGGAATCACCTATGTGGGGCAGCAGACGATG 611 0.5303 MEIEPNPPVVSKKLWNVIRIMFLMLRKGIAKRKIMAEFHLMLKRAGKAIADNPMLHHHYAAFTCRSNDAPSSFISPREYEFSCSNSPAFPFHHVKRKHNHFGSSRFSKSYQYDDVATVNAVQKVLEMLNHDKVEASPSVTLPGFGKSPIGRQLRVTDSPFPLKDDGDSRVDKAAEEFINRFYKDLSSQKRMAALESPMWGSRR 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00715 203 Pfam Cotton fibre expressed protein 169 191 IPR008480 -
Bva04g00715 203 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 3 198 - -
Bva04g00715 203 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 3 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00715 Bva-Chr4 4712871 4713810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00715 - - qsu:112027219 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00715 04 4712871 4713810 Bva08g02197 08 14424659 14425477 ECH
Bva04g00715 04 4712871 4713810 Bva02g02364 02 23151364 23152278 ECH
Bva04g00715 04 4712871 4713810 Bva10g00164 10 3116961 3117692 ECH
Bva04g00715 04 4712871 4713810 Bva04g00715 04 4712871 4713810 ECH