Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00531 ATGGCCGCTTCAATTTATCAACATGCTGCTACGGCCCCTATTTCTGCTTTCTTCATTCTATTCTTATTCCAATTCCTAACAGGTTCGTATTCAGCAACATTCACAATAGTAAACAAGTGCAGTTACACTGTTTGGCCAGGCATTTTATCCGGCGCCGGAACCGCTCCTCTCTCCACCACCGGCTTCGCCCTCCAGCCTGGAGAGTCCAACGCCGTCGCTGTCCCCGCTGCCTGGTCCGGCCGTCTCTGGGGCCGCACCCTCTGCACTCAAAACACCACCACCGGAAAATTCACCTGCGTCACCGGCGACTGCGGCTCCTCCACCATGGAATGCTCCGGCGGTGGAGCGGCCCCTCCCGCCACCCTGGCGGAGTTCACACTGAACGGCGCCGGGGGGCTGGACTTCTTCGACGTGAGTCTCGTGGACGGGTACAATCTGCCGATGATAATCGAGCCTCAGGGCGGAAGCGGCGGCGGAAACTGCTCGGCGACGGGGTGCGTGGTGGACTTGAACAGTGCATGTCCGACGGAACTGAAGGTGATGAGTAGTAGTAACGGCGGTGAGGAGAGCGTGGCGTGTAAAAGCGCGTGTGAAGCATTTGGGGATCCTTCATATTGTTGCAGCGGAGCATTCGGTAGCCCTGACACATGCAAGCCAAGCTCGTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCCTATAGCTACGCCTACGATGACGGCTCAAGCACCTTCACATGTGCCTCTTCTGATTACCTTATCACTTTCTGTCCTTCCCCTTCCACTAGTTCGATCAAATCGGGGAATGGGAAATATCCCGTGGCGGTGCAAGTGTCGGGATCTCATCGTGTGGACAACAACGACGTCGTATTCAACATGATTATTGCCATCTCTCTCTTGGTTGGGTTTTGGCGTTTCTGCCAACTCAATTAG 933 0.5584 MAASIYQHAATAPISAFFILFLFQFLTGSYSATFTIVNKCSYTVWPGILSGAGTAPLSTTGFALQPGESNAVAVPAAWSGRLWGRTLCTQNTTTGKFTCVTGDCGSSTMECSGGGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIIEPQGGSGGGNCSATGCVVDLNSACPTELKVMSSSNGGEESVACKSACEAFGDPSYCCSGAFGSPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASSDYLITFCPSPSTSSIKSGNGKYPVAVQVSGSHRVDNNDVVFNMIIAISLLVGFWRFCQLN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00531 310 Pfam Thaumatin family 38 258 IPR001938 -
Arst5g00531 310 SUPERFAMILY Osmotin, thaumatin-like protein 32 259 IPR037176 -
Arst5g00531 310 PIRSF PR5 1 298 IPR001938 -
Arst5g00531 310 PRINTS Pathogenesis-related protein signature 248 257 IPR001938 -
Arst5g00531 310 PRINTS Pathogenesis-related protein signature 33 45 IPR001938 -
Arst5g00531 310 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Arst5g00531 310 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Arst5g00531 310 CDD TLP-PA 33 257 - -
Arst5g00531 310 FunFam THAUMATIN-LIKE PROTEIN 1 32 258 - -
Arst5g00531 310 SMART tha2 34 258 IPR001938 -
Arst5g00531 310 PANTHER OS03G0233200 PROTEIN 18 258 IPR001938 -
Arst5g00531 310 Gene3D Thaumatin 32 258 IPR037176 -
Arst5g00531 310 ProSiteProfiles Thaumatin family profile. 31 258 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00531 Arst-Chr5 4418286 4420195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00531 14 263 Receptor kinase-like Gene Family AT5G38280 52.988 4.67e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00531 - - gmx:100806478 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00194 8 2520800 2523838 Arst5g00531 5 4418286 4420195 ECH
Arst3g00814 3 5844424 5847002 Arst5g00531 5 4418286 4420195 ECH
Arst5g00531 5 4418286 4420195 Arst5g00531 5 4418286 4420195 ECH
Arst3g00812 3 5828295 5830897 Arst5g00531 5 4418286 4420195 ECH
Arst5g00531 5 4418286 4420195 Arst1g01042 1 10413555 10416075 PCT