Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00194 ATGGAGCATAATAAGCTCACATTAATAAATCCAATCCCAGTACTAATAACGCTGTGTGTATTAGTATCAGAGGGGAAAGCAACTACCTTCACACTACTCAACAAATGTGACTACACTGTGTGGCCGGGAATTCTCACTAACGCTGGTGTCGACCCTCTTCCGGTCACCGGCTTCGCCCTCCGAACCGGCGAGTCCAAAACCATCACGGCACCAACCACCTGGGGCGGCCGTTTCTGGGGCAGGACACTCTGCGCCCAAGACTCCGCCGGAAAATTCTCATGCGGCACTGGCGATTGCGGCTCCGGCAAACTAGAATGTGCTGGCAGCGGTGCCACGCCGCCGGCAACCCTGGCAGAGTTCACCCTCCATGGCGCCGGAGGACTAGATTTCTTTGACGTCAGCTTGGTCGACGGTTACAACCTCCCGATCACGGTGGTTCCGCAGGGTGGCTCCGGCGAAAACTGCACCGTCACGGGGTGCGTGGGAGACCTCAATGGCGATTGTCCATCGGAGCTGAGGGTTATGAGCGAGGATGGGAAACGTGGCGTGGCGTGTAAGAGCGCGTGCGATGCGTTCCGGTTGCCGCAGTATTGCTGCGACGGCGCGTACCGCTCACCGGACACTTGCAAGCCTTCGTCTTACTCGAAGGTGTTCAAGAGCGTGTGCTCACGCGCGTATAGCTACGCGTATGACGACAAGACGAGCACATTTACGTGCGCATCTGCCGATTACACCATTACGTTTTGTCCTTCCCCTGATACTAACCCCAGTAGTAAGAAATCGTGGGAGGGACAAAACTCGAACTCAGATAGTAACGAATCTTCTTCGTCATCATCTCCATCTTCGTCCTCTACTCCAACATCACCACAGGTGAGCAAGGGAGGAATGGTGTACGTAGGTGCACTAGACCAAAGTGAAATACCATGGTCAGCGTGCACTCGTGCTAGGGAATCCCAATCCACTGCAGCCTTCATCATCATTATGGCAATTTGGCGCTTGTGGCAACTGCTCTTTTAG 1017 0.5457 MEHNKLTLINPIPVLITLCVLVSEGKATTFTLLNKCDYTVWPGILTNAGVDPLPVTGFALRTGESKTITAPTTWGGRFWGRTLCAQDSAGKFSCGTGDCGSGKLECAGSGATPPATLAEFTLHGAGGLDFFDVSLVDGYNLPITVVPQGGSGENCTVTGCVGDLNGDCPSELRVMSEDGKRGVACKSACDAFRLPQYCCDGAYRSPDTCKPSSYSKVFKSVCSRAYSYAYDDKTSTFTCASADYTITFCPSPDTNPSSKKSWEGQNSNSDSNESSSSSSPSSSSTPTSPQVSKGGMVYVGALDQSEIPWSACTRARESQSTAAFIIIMAIWRLWQLLF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00194 338 Gene3D Thaumatin 28 250 IPR037176 -
Arst8g00194 338 MobiDBLite consensus disorder prediction 256 293 - -
Arst8g00194 338 ProSiteProfiles Thaumatin family profile. 27 250 IPR001938 -
Arst8g00194 338 CDD TLP-PA 29 249 - -
Arst8g00194 338 Pfam Thaumatin family 34 250 IPR001938 -
Arst8g00194 338 FunFam THAUMATIN-LIKE PROTEIN 1 28 250 - -
Arst8g00194 338 PANTHER OS03G0233200 PROTEIN 18 250 IPR001938 -
Arst8g00194 338 SUPERFAMILY Osmotin, thaumatin-like protein 28 251 IPR037176 -
Arst8g00194 338 SMART tha2 30 250 IPR001938 -
Arst8g00194 338 MobiDBLite consensus disorder prediction 256 292 - -
Arst8g00194 338 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Arst8g00194 338 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Arst8g00194 338 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Arst8g00194 338 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Arst8g00194 338 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00194 Arst-Chr8 2520800 2523838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00194 15 276 Receptor kinase-like Gene Family AT5G38280 50.943 9.05e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00194 - - gmx:100795186 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00194 8 2520800 2523838 Arst5g00531 5 4418286 4420195 ECH
Arst8g00194 8 2520800 2523838 Arst8g00194 8 2520800 2523838 ECH