Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00812 ATGGGTGCTACCTTCACATTCGTCAACAGGTGCGACTACACTGTCTGGCCCGGCATTCTCGCAAATGCCGGTAGCCCAGCACTCGACAGCACCGGTTTCGAGCTTCCAAAGGCCACTTCTAGAACCTTCCAAGCTCCCACCGGTTGGTCCGGTCGCTTCTGGGGCAGAACTGGCTGCAACTTCGACGGATCCGGCTCCGGTTCATGCCTCACCGGCGACTGCGGCTCCGGCCAAATGGAGTGCAACGGCGCCGGTGCAGCCCCTCCCGCCACCCTCGCCGAGTTCACCCTCGGCACCGGCGGTCAGGACTTCTATGACGTGAGCCTGGTGGACGGTTACAACCTTCCGATGATCGTTGAAGGCAGTGGCGGGTCGGGGCAGTGCGCGTCGACGGGTTGCACTTCGGATCTGAACCAGCAGTGCCCGTCGGAGCTTAAAGCATTGGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGGAGCCCTGAGTACTGTTGCAGTGGCGCGTATGGGTCACCTTCCACTTGTAGGCCTTCTATTTACTCGGAGATGTTCAAGGCTGCTTGTCCTCGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACGTGTACGGGTGCTGATTATACGGTTACCTTTTGTCCATCCTCTCCAAGTCAGAAATCTTCAAGAGACACAACACCAATGAGTTCAACAACACCAACAATAGGGTCAGGCATAGGAACACCAATGACACCAACAACGCCCATGGCTTCAGGAACTGGGATTGGAACACAAACAGGAACCGGAACTGGAATCGGAACCGGATCAACAGGATCCCAAGAAGGTGCAGGTTTTGCATACACCGGTGCTGGTGTTGGTGTTGACCCTGGCCTTGGTTATTCATCATCAGTTACTGGTTCTGGTTCCGGTTCGGGTTCCGGCGAAGCCATGCTTGCAGATGGTTCATATTTAGCTGGTTTAGCAATGGGAGACTCACCTAGGAGAACAACATTTTCCTCTGCATTTCTCTATTCTGCAAGCTTTTTTCTTATTCTATCTTGTTATTTCCTTTAG 1065 0.5371 MGATFTFVNRCDYTVWPGILANAGSPALDSTGFELPKATSRTFQAPTGWSGRFWGRTGCNFDGSGSGSCLTGDCGSGQMECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGSGGSGQCASTGCTSDLNQQCPSELKALDGSACKSACEAFGSPEYCCSGAYGSPSTCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSRDTTPMSSTTPTIGSGIGTPMTPTTPMASGTGIGTQTGTGTGIGTGSTGSQEGAGFAYTGAGVGVDPGLGYSSSVTGSGSGSGSGEAMLADGSYLAGLAMGDSPRRTTFSSAFLYSASFFLILSCYFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00812 354 SUPERFAMILY Osmotin, thaumatin-like protein 3 219 IPR037176 -
Arst3g00812 354 ProSitePatterns Thaumatin family signature. 65 81 IPR017949 -
Arst3g00812 354 PRINTS Pathogenesis-related protein signature 65 94 IPR001938 -
Arst3g00812 354 PRINTS Pathogenesis-related protein signature 208 217 IPR001938 -
Arst3g00812 354 PRINTS Pathogenesis-related protein signature 103 119 IPR001938 -
Arst3g00812 354 PRINTS Pathogenesis-related protein signature 4 16 IPR001938 -
Arst3g00812 354 PRINTS Pathogenesis-related protein signature 52 63 IPR001938 -
Arst3g00812 354 Pfam Thaumatin family 9 218 IPR001938 -
Arst3g00812 354 FunFam THAUMATIN-LIKE PROTEIN 1 3 218 - -
Arst3g00812 354 Gene3D Thaumatin 3 218 IPR037176 -
Arst3g00812 354 PANTHER OS03G0233200 PROTEIN 3 218 IPR001938 -
Arst3g00812 354 SMART tha2 5 218 IPR001938 -
Arst3g00812 354 CDD TLP-PA 4 217 - -
Arst3g00812 354 MobiDBLite consensus disorder prediction 218 272 - -
Arst3g00812 354 ProSiteProfiles Thaumatin family profile. 2 218 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00812 Arst-Chr3 5828295 5830897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00812 1 248 Receptor kinase-like Gene Family AT5G38280 46.970 4.02e-79 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00812 - - ahf:112789067 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00812 3 5828295 5830897 Arst3g00812 3 5828295 5830897 ECH
Arst3g00812 3 5828295 5830897 Arst5g00531 5 4418286 4420195 ECH