Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01042 ATGGCAGTTGCTATTCTACTCTTCATCTCACTCTCTCACTTCGTCACAGGTGCAAATTCAGCCACATTCAATATTGTAAACAAGTGCAGCTACCCAGTCTGGCCGGGACTTTTGTCCGGCGCCGGAACACCACAACTCTCCACTACCGGATTCGCCCTTCAACCTGGCGAATCTAATGTGGTGTCCATCCCAGCCGGATGGTCCGGCCGTGTATGGGGCCGGACCCTTTGCTCCACAGACTCCGTCGGAAAATTCTCATGTCTCACCGGAGACTGCGGTTCTTCCGCCGTAGAATGTGGTGGCGCCGGCGCTGTACCTCCGGCGACTCTGGCGGAATTCACCCTAAACGGCGCCGGAGGACTAGATTTCTATGACGTGAGCCTGGTTGACGGTTACAACCTCCCGATGATGGTGGTGCCTCACGGCGGCGGAAACTGTACGGCGACGGGATGCGTGGCGGATTTGAATGGTGGGTGTCCATCAGAGCTGAAGGTGAAGGCGGGAAGAGAGGAAGCGCGTGACGAGGGCGTGGCTTGCAAGAGCGCGTGTGAAGCGTTCGGTGATCCGAAGTACTGTTGCAGTGGAGATTACGCGACGCCGCAGAGTTGCAAGCCCACTTCGTACTCGCAGTTCTTCAAGCGCGCGTGCCCACGCGCTTATAGCTACGCTTATGATGATGGCACCAGCACCTTCACTTGTGCTTCTGCGGATTATCTCATCACTTTCTGTCCCAAACCTCCCAAAAGTTCAATGAAGGTTGTGAATGGAAAATTTCCAACGGCAGCAGATATCTCTAGAGGCCACAAGCTCAAACATGAATCAGCCACTTACATGACAATAGCTATTACTGCTATTTTAGTTTCAATTTGGTGGAGATTCAATTAA 885 0.5333 MAVAILLFISLSHFVTGANSATFNIVNKCSYPVWPGLLSGAGTPQLSTTGFALQPGESNVVSIPAGWSGRVWGRTLCSTDSVGKFSCLTGDCGSSAVECGGAGAVPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMMVVPHGGGNCTATGCVADLNGGCPSELKVKAGREEARDEGVACKSACEAFGDPKYCCSGDYATPQSCKPTSYSQFFKRACPRAYSYAYDDGTSTFTCASADYLITFCPKPPKSSMKVVNGKFPTAADISRGHKLKHESATYMTIAITAILVSIWWRFN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01042 294 CDD TLP-PA 22 243 - -
Arst1g01042 294 Gene3D Thaumatin 21 244 IPR037176 -
Arst1g01042 294 SUPERFAMILY Osmotin, thaumatin-like protein 21 244 IPR037176 -
Arst1g01042 294 ProSiteProfiles Thaumatin family profile. 20 244 IPR001938 -
Arst1g01042 294 PANTHER OS03G0233200 PROTEIN 7 244 IPR001938 -
Arst1g01042 294 SMART tha2 23 244 IPR001938 -
Arst1g01042 294 PIRSF PR5 1 286 IPR001938 -
Arst1g01042 294 Pfam Thaumatin family 27 244 IPR001938 -
Arst1g01042 294 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Arst1g01042 294 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Arst1g01042 294 PRINTS Pathogenesis-related protein signature 70 81 IPR001938 -
Arst1g01042 294 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Arst1g01042 294 FunFam THAUMATIN-LIKE PROTEIN 1 21 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01042 Arst-Chr1 10413555 10416075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01042 6 244 Receptor kinase-like Gene Family AT5G38280 53.279 3.60e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01042 - - gmx:100809419 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01042 1 10413555 10416075 Arst1g01042 1 10413555 10416075 ECH
Arst1g01042 1 10413555 10416075 Arst5g00530 5 4403372 4404854 ECH
Arst3g00814 3 5844424 5847002 Arst1g01042 1 10413555 10416075 ECH
Arst5g00531 5 4418286 4420195 Arst1g01042 1 10413555 10416075 PCT