Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00814 ATGGGTCGCCTTGTCCTCTTTCTCACTATCATCGTCTTCTTCGCATTCTCTTTCTTCTCAGAGGTACAATCAGCGTCGTTCAGGGTTATTAACAAGTGCCGCCACCCAATATGGCCTGGGCTTCTCTCCGGCGCCACCTCGCCGCCGCTACCGACCACCGGCTTTCTCCTCAGCGCCGGAAGATCGAGGACAATCACCATCCCAAGGTCCTGGTCGGGTCGGATTTGGGCGAGGACACTCTGCGGCCAAGACTCCGACGGAAAGTTCTCCTGCGTCACCGCAGACTGCGGCTCCGGCAAGGTGGAGTGTGGTGGCGGGGGAGCAAAGCCGCCGGCAACATTAGCGGAGTTCACTCTCAACGGAGCTGACGGGCTTGACTTCTATGACGTGAGCCTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCTCAGGGAGGGACGAGAGGAGGGTGCAGCGCCACCGGGTGCCTGGTGGACTTGAACGGCGCGTGTCCTTCAGATCTGAGAGTGGCGCGTGGGAATGGAACTAAAAGTGGTAGAGGTGGTGGGGTCGCGTGCAGAAGCGCGTGTGAGGCGTTTGGGGACCCAAGGTATTGTTGCAGTGAGGCTTACTCTACGCCTGACACGTGTGGCCCTTCAGCTTACTCGCTTTACTTCAAACACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACCAGCACTTACACGTGTGCTTCCGCTAATTACTTAATCATTTTCTGCCCTTTGCCTTACACCAGCCAAAAGGTGCTTGGAGCAAGAAAAGATGGCGCGCCGCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCCACACTCTGGCAGTTCTTCATCCTCAGGTCCGACCCGAACACAGAGTATTGTAGCTTATGTTGTGGCCATCGCGGTGGCATTTTTCCTCTTCTGCCCTTGTTTACATGCCTTATGA 963 0.5556 MGRLVLFLTIIVFFAFSFFSEVQSASFRVINKCRHPIWPGLLSGATSPPLPTTGFLLSAGRSRTITIPRSWSGRIWARTLCGQDSDGKFSCVTADCGSGKVECGGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGACPSDLRVARGNGTKSGRGGGVACRSACEAFGDPRYCCSEAYSTPDTCGPSAYSLYFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGAPLPLVNKTMMYLSRPHSGSSSSSGPTRTQSIVAYVVAIAVAFFLFCPCLHAL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00814 320 Gene3D Thaumatin 25 252 IPR037176 -
Arst3g00814 320 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Arst3g00814 320 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Arst3g00814 320 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Arst3g00814 320 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Arst3g00814 320 ProSiteProfiles Thaumatin family profile. 24 252 IPR001938 -
Arst3g00814 320 PANTHER OS03G0233200 PROTEIN 12 252 IPR001938 -
Arst3g00814 320 SMART tha2 27 252 IPR001938 -
Arst3g00814 320 FunFam THAUMATIN-LIKE PROTEIN 1 25 252 - -
Arst3g00814 320 Pfam Thaumatin family 31 252 IPR001938 -
Arst3g00814 320 CDD TLP-PA 26 251 - -
Arst3g00814 320 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00814 Arst-Chr3 5844424 5847002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00814 5 252 Receptor kinase-like Gene Family AT5G38280 49.600 1.29e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00814 - - gmx:100802252 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00814 3 5844424 5847002 Arst3g00814 3 5844424 5847002 ECH
Arst3g00814 3 5844424 5847002 Arst5g00531 5 4418286 4420195 ECH
Arst3g00814 3 5844424 5847002 Arst1g01042 1 10413555 10416075 ECH
Arst3g00814 3 5844424 5847002 Arst5g00530 5 4403372 4404854 ECH