Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3780 ATGAGTCTGAAACATGTTCTAGTTCTGCCATTTCCAGCACAGGGGCATGTGAACCCTTTAATGCACTTATCACACAAACTAGTTCAACATGGCTGCAAAGTTACCTTTGTCAACACTGAGTTCAACCACAAGAGAGTTCTTACTGCAATGAATGGTAAGATTACTCTTGATGGTTCAGAAGTGGAATTAGTCTCACTTGCTGATGGGTTAGGACCTGAAGATGATAGAAGTGACATCGCTGGTTTAATTGCTTCAATGGTGAGAACCATGCCTAGTGATCTTGGAATGCTTATAAGGGACATTAATTCCAGGGATGATGGGAGTAACAGAATCACAAGCATAGTTTGTGACACATATATGGCATGGGCTTTGGAAATAGCACAAAAGCTTGCAATCAAAGGTGCTATCATCATCCCTTCATCGTCAGCTATGCTTGCCTTGGAAGACAACATTCCAAAGCTTATTGAGGATGGAATTATGGATAGTGATGGATTCCCCATTAAAAAAGGGAAATTTCAACTATCTCCAAAAATGCCTAATATGAATATAACTGATATGCCTTGGTCCTGCTTTAGTGATGCATCATCACAAAAGACTGTATTTCATTACCTTGCAAGATCAATACAATGGTCACATTTAACTGATTGGTGGCTTTCCAACACAACCATAGAGCTAGAACCTGGTGCATTATCCTTATGCCCAAAGATCTTACCAATTGGGCCAATAAAAGAGTGTCACAAGTTTAGATCATTGGGCCAATTCTGGCAAGAAGATCATTCTTGCTTGAGTTGGCTTGATCAACAAGCACCATGTTCTGTTATATATGTTGCATTTGGTAGTTTCACTATTTTTGACCCAAACCAATTCAAAGAACTTGCACTTGGGCTTGAACTTACTAATAGGCCTTTTCTTTGGGTTGTGCGTGAAGATTCTAATGGTAGTGTTACAAAACACAAATACCCTAATGAATTTCAAGGCACTAAGGGTAAAATTGTCAAATGGACACCCCAACAAATGGTGTTAAAACACCCTTCTATAGCTTGTTTTGTTAGTCATTGTGGTTGGAATTCTACTATGGATGGTGTGTCTAATGGGGTACCTTTCTTGTGTTGGCCTTATTTTGCTGATCAATTTGTAGACAAGGCATATATTTGTGATTTTTGGAAGGTGGGTTTGGGATTTGAGGAGGATGAGAAAGGGATTATATCACGTTGGGAGATAAAGAAGAAAGTGGAACAACTCTTGGGAGATGAAGAGATTAAGGGAAGGTCTAAGAAGATGAAGGATATGATTATGAATAACATTGCAAAAGATGGCAAGTCCACACAGAACTTCAACAAGTTTATGAAGTGGCTCAATGAATGA 1365 0.3897 MSLKHVLVLPFPAQGHVNPLMHLSHKLVQHGCKVTFVNTEFNHKRVLTAMNGKITLDGSEVELVSLADGLGPEDDRSDIAGLIASMVRTMPSDLGMLIRDINSRDDGSNRITSIVCDTYMAWALEIAQKLAIKGAIIIPSSSAMLALEDNIPKLIEDGIMDSDGFPIKKGKFQLSPKMPNMNITDMPWSCFSDASSQKTVFHYLARSIQWSHLTDWWLSNTTIELEPGALSLCPKILPIGPIKECHKFRSLGQFWQEDHSCLSWLDQQAPCSVIYVAFGSFTIFDPNQFKELALGLELTNRPFLWVVREDSNGSVTKHKYPNEFQGTKGKIVKWTPQQMVLKHPSIACFVSHCGWNSTMDGVSNGVPFLCWPYFADQFVDKAYICDFWKVGLGFEEDEKGIISRWEIKKKVEQLLGDEEIKGRSKKMKDMIMNNIAKDGKSTQNFNKFMKWLNE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3780 454 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 388 IPR002213 GO:0008194
Amo14g3780 454 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 450 - -
Amo14g3780 454 Gene3D Glycogen Phosphorylase B; 251 432 - -
Amo14g3780 454 CDD GT1_Gtf-like 5 436 IPR002213 GO:0008194
Amo14g3780 454 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 450 - -
Amo14g3780 454 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 452 - -
Amo14g3780 454 Gene3D Glycogen Phosphorylase B; 3 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3780 Amo-Chr14 143101236 143103908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3780 1 452 Glycosyltransferase AT3G02100 43.913 2.59e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3780 - - gmx:100816177 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3780 14 143101236 143103908 Amo14g3780 14 143101236 143103908 ECH
Amo20g3419 20 143555533 143557794 Amo14g3780 14 143101236 143103908 PCT
Amo10g2844 10 93455397 93459241 Amo14g3780 14 143101236 143103908 PCT
Amo14g3780 14 143101236 143103908 Amo20g3452 20 144004361 144006926 PCT
Amo14g3780 14 143101236 143103908 Amo10g2825 10 93268638 93271082 PCT