Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00422 ATGGCTCTGTTTTCGTACCACCGACATTCTTCTCAGCCCTTCTTCACTTTCTTCCTTTTCCTCCTCCTTAAAGGGGTTTCAGGTGCAACATTCACGTTCGTAAACAAGTGCGATCACACAGTATGGCCAGGGATCTTGGGCAAACCAGATATCGGAAGCACAGGTTTCGAGCTCTCAAAGGGTTCCACAAAGAGTTTCCAAGCTCCTACGGGCTGGTCGGGAAGATTCTGGGGCAGAACCGATTGCAAATTCGACGATCAAGGCAAAGGAACATGCGCCACCGCCGACTGCGGCTCCGGCGAGATCAACTGCAACGGAGGCGGAGCCTCTCCTCCGGCCACCCTCGCCGAGTTCACTCTCGGCACCGGTTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTCCCCATGATGGTGGAGGCCAGCGGCGGCACCGGCTCGTGCGGCGCCACGGGATGCGGCGCTGACTTAAACAAGCGGTGCCCGTCGGAGCTTCGAGTGGAGGGCGGTGACGCGTGCCGCAGCGCGTGTGATGCATTCAAGAAACCGGAGTATTGCTGCGACGGAGAATTCGGAAACCCTAACACGTGTAAGCCATCTGTGTACTCTGAAATGTTCAAGAGTGCATGCCCCAAATCTTATAGCTATGCTTATGATGATGCCACCAGCACTTTCACTTGCTCCGATGCTGATTACACCATCACATTTTGTCCCTCTTCTCCGAGTCTAAAATCTTCTACGGATTCATCCCCCAAGGCAGCTGGTTCAGATTCGGGTTCGGATTTAGGGTCGGGGTCAGGTTCGTCGGTGGAGCAGTCGGCACTAGGTTCCACATCATGGCTAGCGGATATGGCTACGGCCACCGGGTCGGCGTCCACAAGAAGCAAGCCTTTTGGGGGATCAATTTTGGTGGCGGTTGCTTTCTTTCTTTCTCTTTTGCTAGCTTAG 957 0.5475 MALFSYHRHSSQPFFTFFLFLLLKGVSGATFTFVNKCDHTVWPGILGKPDIGSTGFELSKGSTKSFQAPTGWSGRFWGRTDCKFDDQGKGTCATADCGSGEINCNGGGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVEASGGTGSCGATGCGADLNKRCPSELRVEGGDACRSACDAFKKPEYCCDGEFGNPNTCKPSVYSEMFKSACPKSYSYAYDDATSTFTCSDADYTITFCPSSPSLKSSTDSSPKAAGSDSGSDLGSGSGSSVEQSALGSTSWLADMATATGSASTRSKPFGGSILVAVAFFLSLLLA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00422 318 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Adu05g00422 318 CDD TLP-PA 30 240 - -
Adu05g00422 318 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 7 266 - -
Adu05g00422 318 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Adu05g00422 318 MobiDBLite consensus disorder prediction 244 274 - -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Adu05g00422 318 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Adu05g00422 318 Gene3D Thaumatin 29 241 IPR037176 -
Adu05g00422 318 SMART tha2 31 241 IPR001938 -
Adu05g00422 318 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Adu05g00422 318 PANTHER OS03G0233200 PROTEIN 7 266 IPR001938 -
Adu05g00422 318 Pfam Thaumatin family 35 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00422 Adu-Chr5 4384022 4385575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00422 18 245 Receptor kinase-like Gene Family AT5G38280 47.561 3.98e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00422 - - gmx:100802906 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00163 08 2508463 2511753 Adu05g00422 05 4384022 4385575 ECH
Adu03g00634 03 5838444 5840995 Adu05g00422 05 4384022 4385575 ECH
Adu05g00422 05 4384022 4385575 Adu05g00422 05 4384022 4385575 ECH
Adu03g00633 03 5822754 5825892 Adu05g00422 05 4384022 4385575 ECH
Adu05g00422 05 4384022 4385575 Adu01g00769 01 10416356 10418861 PCT