Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00163 ATGGAGCATAATAAGCTCACATTAATAAATCCAATCCCAGTACTAATAACGCTGTGTGTATTAGTATCAGAGGGGAAAGCAACTACCTTCACACTACTCAACAAATGTGACTACACTGTGTGGCCGGGAATTCTCACTAACGCTGGTGTCGACCCTCTTCCGGTCACCGGCTTCGCCCTCCGAACCGGCGAGTCCAAAACCATCACGGCACCAACCACCTGGGGCGGCCGTTTCTGGGGCAGGACACTCTGCGCCCAAGACTCCGCCGGAAAATTCTCATGCGGCACTGGCGATTGCGGCTCCGGCAAACTAGAATGTGCTGGCAGCGGTGCCACGCCGCCGGCAACCCTGGCAGAGTTCACCCTCCATGGCGCCGGAGGACTAGATTTCTTTGACGTCAGCTTGGTCGACGGTTACAACCTCCCGATCACGGTGGTTCCGCAGGGTGGCTCCGGCGAAAACTGCACCGTCACGGGGTGCGTGGGAGACCTCAATGGCGATTGTCCATCGGAGCTGAGGGTTATGAGCGAGGATGGGAAACGTGGCGTGGCGTGTAAGAGCGCGTGCGATGCGTTCCGGTTGCCGCAGTATTGCTGCGACGGCGCGTACCGCTCACCGGACACTTGCAAGCCTTCGTCTTACTCGAAGGTGTTCAAGAGCGTGTGCTCACGCGCGTATAGCTACGCGTATGACGACAAGACGAGCACATTTACGTGCGCATCTGCCGATTACACCATTACGTTTTGTCCTTCCCCTGATACTAACCCCAGTAGTAAGAAATCGTGGGAGGGACAAAACTCGAACTCAGATAGTAACGAATCTTCTTCGTCATCATCTCCATCTTCGTCCTCTACTCCAACATCACCACAGGTGAGCAAGGGAGGAATGGTGTACGTAGGTGCACTAGACCAAAGTGAAATACCATGGTCAGCGTGCACTCGTGCTAGGGAATCCCAATCCACTGCAGCCTTCATCATCATTATGGCAATTTGGCGCTTGTGGCAACTGCTCTTTTAG 1017 0.5457 MEHNKLTLINPIPVLITLCVLVSEGKATTFTLLNKCDYTVWPGILTNAGVDPLPVTGFALRTGESKTITAPTTWGGRFWGRTLCAQDSAGKFSCGTGDCGSGKLECAGSGATPPATLAEFTLHGAGGLDFFDVSLVDGYNLPITVVPQGGSGENCTVTGCVGDLNGDCPSELRVMSEDGKRGVACKSACDAFRLPQYCCDGAYRSPDTCKPSSYSKVFKSVCSRAYSYAYDDKTSTFTCASADYTITFCPSPDTNPSSKKSWEGQNSNSDSNESSSSSSPSSSSTPTSPQVSKGGMVYVGALDQSEIPWSACTRARESQSTAAFIIIMAIWRLWQLLF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00163 338 ProSiteProfiles Thaumatin family profile. 27 250 IPR001938 -
Adu08g00163 338 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Adu08g00163 338 MobiDBLite consensus disorder prediction 256 293 - -
Adu08g00163 338 CDD TLP-PA 29 249 - -
Adu08g00163 338 SUPERFAMILY Osmotin, thaumatin-like protein 28 251 IPR037176 -
Adu08g00163 338 PANTHER BNAA02G17480D PROTEIN 14 277 - -
Adu08g00163 338 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Adu08g00163 338 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Adu08g00163 338 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Adu08g00163 338 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Adu08g00163 338 PANTHER OS03G0233200 PROTEIN 14 277 IPR001938 -
Adu08g00163 338 Gene3D Thaumatin 28 250 IPR037176 -
Adu08g00163 338 MobiDBLite consensus disorder prediction 256 292 - -
Adu08g00163 338 SMART tha2 30 250 IPR001938 -
Adu08g00163 338 Pfam Thaumatin family 34 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00163 Adu-Chr8 2508463 2511753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00163 15 276 Receptor kinase-like Gene Family AT5G38280 50.943 9.05e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00163 - - gmx:100795186 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00163 08 2508463 2511753 Adu05g00422 05 4384022 4385575 ECH
Adu08g00163 08 2508463 2511753 Adu08g00163 08 2508463 2511753 ECH