Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00769 ATGGCAGTTGCTATTCTACTCTTCATCTCACTCTCTCACTTCGTCACAGGTGCAAATTCAGCCACATTCAATATTGTAAACAAGTGCAGCTACCCAGTCTGGCCGGGACTTTTGTCCGGCGCCGGAACACCACAACTCTCCACTACCGGATTCGCCCTTCAACCTGGCGAATCTAATGTGGTGTCCATCCCAGCCGGATGGTCCGGCCGTGTATGGGGCCGGACCCTTTGCTCCACAGACTCCGTCGGAAAATTCTCATGTCTCACCGGAGACTGCGGTTCTTCCGCCGTAGAATGTGGTGGCGCCGGCGCTGTACCTCCGGCGACTCTGGCGGAATTCACCCTAAACGGCGCCGGAGGACTAGATTTCTATGACGTGAGCCTGGTTGACGGTTACAACCTCCCGATGATGGTGGTGCCTCACGGCGGCGGAAACTGTACGGCGACGGGATGCGTGGCGGATTTGAATGGTGGGTGTCCATCAGAGCTGAAGGTGAAGGCGGGAAGAGAGGAAGCGCGTGACGAGGGCGTGGCTTGCAAGAGCGCGTGTGAAGCGTTCGGTGATCCGAAGTACTGTTGCAGTGGAGATTACGCGACGCCGCAGAGTTGCAAGCCCACTTCGTACTCGCAGTTCTTCAAGCGCGCGTGCCCACGCGCTTATAGCTACGCTTATGATGATGGCACCAGCACCTTCACTTGTGCTTCTGCGGATTATCTCATCACTTTCTGTCCCAAACCTCCCAAAAGTTCAATGAAGGTTGTGAATGGAAAATTTCCAACGGCAGCAGATATCTCTAGAGGCCACAAGCTCAAACATGAATCAGCCACTTACATGACAATAGCTATTACTGCTATTTTAGTTTCAATTTGGTGGAGATTCAATTAA 885 0.5333 MAVAILLFISLSHFVTGANSATFNIVNKCSYPVWPGLLSGAGTPQLSTTGFALQPGESNVVSIPAGWSGRVWGRTLCSTDSVGKFSCLTGDCGSSAVECGGAGAVPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMMVVPHGGGNCTATGCVADLNGGCPSELKVKAGREEARDEGVACKSACEAFGDPKYCCSGDYATPQSCKPTSYSQFFKRACPRAYSYAYDDGTSTFTCASADYLITFCPKPPKSSMKVVNGKFPTAADISRGHKLKHESATYMTIAITAILVSIWWRFN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00769 294 Gene3D Thaumatin 21 244 IPR037176 -
Adu01g00769 294 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Adu01g00769 294 PRINTS Pathogenesis-related protein signature 70 81 IPR001938 -
Adu01g00769 294 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Adu01g00769 294 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Adu01g00769 294 SUPERFAMILY Osmotin, thaumatin-like protein 21 244 IPR037176 -
Adu01g00769 294 CDD TLP-PA 22 243 - -
Adu01g00769 294 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 9 263 - -
Adu01g00769 294 ProSiteProfiles Thaumatin family profile. 20 244 IPR001938 -
Adu01g00769 294 SMART tha2 23 244 IPR001938 -
Adu01g00769 294 Pfam Thaumatin family 27 244 IPR001938 -
Adu01g00769 294 PIRSF PR5 1 286 IPR001938 -
Adu01g00769 294 PANTHER OS03G0233200 PROTEIN 9 263 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00769 Adu-Chr1 10416356 10418861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00769 6 244 Receptor kinase-like Gene Family AT5G38280 53.279 3.60e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00769 - - gmx:100809419 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00769 01 10416356 10418861 Adu01g00769 01 10416356 10418861 ECH
Adu01g00769 01 10416356 10418861 Adu05g00423 05 4399008 4400849 ECH
Adu03g00634 03 5838444 5840995 Adu01g00769 01 10416356 10418861 ECH
Adu05g00422 05 4384022 4385575 Adu01g00769 01 10416356 10418861 PCT