Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00633 ATGGCTACCAAGAGACTGAGACGCCCTGCATTCTTCTCTTCTCTTCCGCCGCCGCCACCACTACCACCACCCTTCCATGCACACCACGTAGCTAACAAACAAACCAACCAACAAGCAACAACACAAGAAAAAAAAAAATTCTCTTCCTCCCACTCCACTCTCATTATCTTCTTACTTCTCACGCTCACACCCCAACAAGGTACTGTTATGGGTGCTACCTTCACATTCGTCAACAGGTGCGACTACACTGTCTGGCCCGGCATTCTCGCAAATGCCGGTAGCCCAGCACTCGACAGCACCGGTTTCGAGCTTCCAAAGGCCACTTCTAGAACCTTCCAAGCTCCCACCGGTTGGTCCGGTCGCTTCTGGGGCAGAACTGGCTGCAACTTCGACGGATCCGGCTCCGGTTCATGCCTCACCGGCGACTGCGGCTCCGGCCAAATGGAGTGCAACGGCGCCGGTGCAGCCCCTCCCGCCACCCTCGCCGAGTTCACCCTCGGCACCGGCGGTCAGGACTTCTATGACGTGAGCCTGGTGGACGGTTACAACCTTCCGATGATCGTTGAAGGCAGTGGCGGGTCGGGGCAGTGCGCGTCGACGGGTTGCACTTCGGATCTGAACCAGCAGTGCCCGTCGGAGCTTAAAGCATTGGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGGAGCCCTGAGTACTGTTGCAGTGGCGCGTATGGGTCACCTTCCACTTGTAGGCCTTCTATTTACTCGGAGATGTTCAAGGCTGCTTGTCCTCGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACGTGTACGGGTGCTGATTATACGGTTACCTTTTGTCCATCCTCTCCAAGTCAGAAATCTTCAAGAGACACAACACCAATGAGTTCAACAACACCAACAATAGGGTCAGGCATAGGAACACCAATGACACCAACAACGCCCATGGCTTCAGGAACTGGGATTGGAACACAAACAGGAACCGGAACTGGAATCGGAACCGGATCAACAGGATCCCAAGAAGGTGCAGGTTTTGCATACACCGGTGCTGGTGTTGGTGTTGACCCTGGCCTTGGTTATTCATCATCAGTTACTGGTTCTGGTTCCGGTTCGGGTTCCGGCGAAGCCATGCTTGCAGATGGTTCATATTTAGCTGGTTTAGCAATGGGAGACTCACCTAGGAGAACAACATTTTCCTCTGCATTTCTCTATTCTGCAAGCTTTTTTCTTATTCTATCTTGTTATTTCCTTTAG 1272 0.5275 MATKRLRRPAFFSSLPPPPPLPPPFHAHHVANKQTNQQATTQEKKKFSSSHSTLIIFLLLTLTPQQGTVMGATFTFVNRCDYTVWPGILANAGSPALDSTGFELPKATSRTFQAPTGWSGRFWGRTGCNFDGSGSGSCLTGDCGSGQMECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGSGGSGQCASTGCTSDLNQQCPSELKALDGSACKSACEAFGSPEYCCSGAYGSPSTCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSRDTTPMSSTTPTIGSGIGTPMTPTTPMASGTGIGTQTGTGTGIGTGSTGSQEGAGFAYTGAGVGVDPGLGYSSSVTGSGSGSGSGEAMLADGSYLAGLAMGDSPRRTTFSSAFLYSASFFLILSCYFL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00633 423 ProSitePatterns Thaumatin family signature. 134 150 IPR017949 -
Adu03g00633 423 PANTHER OS03G0233200 PROTEIN 52 313 IPR001938 -
Adu03g00633 423 MobiDBLite consensus disorder prediction 287 341 - -
Adu03g00633 423 ProSiteProfiles Thaumatin family profile. 71 287 IPR001938 -
Adu03g00633 423 Pfam Thaumatin family 78 287 IPR001938 -
Adu03g00633 423 PRINTS Pathogenesis-related protein signature 134 163 IPR001938 -
Adu03g00633 423 PRINTS Pathogenesis-related protein signature 277 286 IPR001938 -
Adu03g00633 423 PRINTS Pathogenesis-related protein signature 121 132 IPR001938 -
Adu03g00633 423 PRINTS Pathogenesis-related protein signature 172 188 IPR001938 -
Adu03g00633 423 PRINTS Pathogenesis-related protein signature 73 85 IPR001938 -
Adu03g00633 423 CDD TLP-PA 73 286 - -
Adu03g00633 423 SMART tha2 74 287 IPR001938 -
Adu03g00633 423 MobiDBLite consensus disorder prediction 1 24 - -
Adu03g00633 423 Gene3D Thaumatin 72 287 IPR037176 -
Adu03g00633 423 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 52 313 - -
Adu03g00633 423 SUPERFAMILY Osmotin, thaumatin-like protein 72 288 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00633 Adu-Chr3 5822754 5825892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00633 55 317 Receptor kinase-like Gene Family AT5G38280 46.237 5.52e-80 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00633 - - ahf:112789067 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00633 03 5822754 5825892 Adu03g00633 03 5822754 5825892 ECH
Adu03g00633 03 5822754 5825892 Adu05g00422 05 4384022 4385575 ECH