Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00634 ATGGGTCGCCTTGTCCTCTTTCTCACTATCATCGTCTTCTTCGCATTCTCTTTCTTCTCAGAGGTACAATCAGCGTCGTTCAGGGTTATTAACAAGTGCCGCCACCCAATATGGCCTGGGCTTCTCTCCGGCGCCACCTCGCCGCCGCTACCGACCACCGGCTTTCTCCTCAGCGCCGGAAGATCGAGGACAATCACCATCCCAAGGTCCTGGTCGGGTCGGATTTGGGCGAGGACACTCTGCGGCCAAGACTCCGACGGAAAGTTCTCCTGCGTCACCGCAGACTGCGGCTCCGGCAAGGTGGAGTGTGGTGGCGGGGGAGCAAAGCCGCCGGCAACATTAGCGGAGTTCACTCTCAACGGAGCTGACGGGCTTGACTTCTATGACGTGAGCCTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCTCAGGGAGGGACGAGAGGAGGGTGCAGCGCCACCGGGTGCCTGGTGGACTTGAACGGCGCGTGTCCTTCAGATCTGAGAGTGGCGCGTGGGAATGGAACTAAAAGTGGTAGAGGTGGTGGGGTCGCGTGCAGAAGCGCGTGTGAGGCGTTTGGGGACCCAAGGTATTGTTGCAGTGAGGCTTACTCTACGCCTGACACGTGTGGCCCTTCAGCTTACTCGCTTTACTTCAAACACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACCAGCACTTACACGTGTGCTTCCGCTAATTACTTAATCATTTTCTGCCCTTTGCCTTACACCAGCCAAAAGGTGCTTGGAGCAAGAAAAGATGGCGCGCCGCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCCACACTCTGGCAGTTCTTCATCCTCAGGCAGATAG 882 0.5624 MGRLVLFLTIIVFFAFSFFSEVQSASFRVINKCRHPIWPGLLSGATSPPLPTTGFLLSAGRSRTITIPRSWSGRIWARTLCGQDSDGKFSCVTADCGSGKVECGGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGACPSDLRVARGNGTKSGRGGGVACRSACEAFGDPRYCCSEAYSTPDTCGPSAYSLYFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGAPLPLVNKTMMYLSRPHSGSSSSSGR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00634 293 CDD TLP-PA 26 251 - -
Adu03g00634 293 SMART tha2 27 252 IPR001938 -
Adu03g00634 293 PIRSF PR5 1 284 IPR001938 -
Adu03g00634 293 ProSiteProfiles Thaumatin family profile. 24 252 IPR001938 -
Adu03g00634 293 Gene3D Thaumatin 25 252 IPR037176 -
Adu03g00634 293 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 263 - -
Adu03g00634 293 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Adu03g00634 293 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Adu03g00634 293 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Adu03g00634 293 PANTHER OS03G0233200 PROTEIN 6 263 IPR001938 -
Adu03g00634 293 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Adu03g00634 293 Pfam Thaumatin family 31 252 IPR001938 -
Adu03g00634 293 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00634 Adu-Chr3 5838444 5840995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00634 5 252 Receptor kinase-like Gene Family AT5G38280 49.600 4.87e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00634 - - ccaj:109798931 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00634 03 5838444 5840995 Adu03g00634 03 5838444 5840995 ECH
Adu03g00634 03 5838444 5840995 Adu05g00422 05 4384022 4385575 ECH
Adu03g00634 03 5838444 5840995 Adu01g00769 01 10416356 10418861 ECH
Adu03g00634 03 5838444 5840995 Adu05g00423 05 4399008 4400849 ECH