Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2247 ATGACTGAGGAGCAATCCAAAACTGTGTCTGAGAGTACTACTACTCCAACTGAGCCTGTTGCTCATGACCCTCCAAAGGAGGATGTGGCTCAAGAGAAATCTGTCATTCCACAACCCTCTCCTTTTGCTGATGACTCCAAAGCTCTTTTACTTGTTGAGAAGACTGGTGAAGTTGCTGTAGAGAAACCAATTGATGGATCTGTGAACCGAGATGCTGTCCTTGCGAGAGTTGCAACGGAGAAGAGGTTGTCACTGATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGGCTTACAAAAACATTTCATCAATTTCAGCATGGGAGAACAGTAAGAAAGCTGCAACGGAGGCTGAATTGAGAAAGATTGAAGAACAACTGGAGAAGAAAAAGGCAGAATATGGAGAGAAGTTGAAAAACAAAATAGCTACAATCCACCGAGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCAAAAAAGGGGAAGATTTCTTGAAGGCAGAAGAGACAGCTGCAAAATACAGGGCAACTGGAACAGCCCCAAAGAAACTCTTTGGTTGTTTCTATTAA 579 0.4266 MTEEQSKTVSESTTTPTEPVAHDPPKEDVAQEKSVIPQPSPFADDSKALLLVEKTGEVAVEKPIDGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAYKNISSISAWENSKKAATEAELRKIEEQLEKKKAEYGEKLKNKIATIHREAEEKRAFIEAKKGEDFLKAEETAAKYRATGTAPKKLFGCFY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2247 192 MobiDBLite consensus disorder prediction 1 43 - -
Vra8g2247 192 Pfam Remorin, N-terminal region 27 77 IPR005518 -
Vra8g2247 192 PANTHER OS02G0117200 PROTEIN 7 191 - -
Vra8g2247 192 PANTHER REMORIN 1.4 7 191 - -
Vra8g2247 192 Coils Coil 116 147 - -
Vra8g2247 192 Pfam Remorin, C-terminal region 81 186 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2247 Vra-Chr8 40746094 40748961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2247 - - gmx:100305501 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2247 8 40746094 40748961 Vra11g0295 11 2097831 2100411 ECH
Vra4g0718 4 13560345 13562932 Vra8g2247 8 40746094 40748961 ECH
Vra11g0295 11 2097831 2100411 Vra8g2247 8 40746094 40748961 ECH
Vra8g2247 8 40746094 40748961 Vra8g2247 8 40746094 40748961 ECH
Vra8g2247 8 40746094 40748961 Vra1g1867 1 35621674 35624287 PCT