Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0718 ATGGAAGAGCCGCAATCGAAGCCCGAAACTGTCCCTTCTTCGGCTTTGGTTGTGGCTGAGGAGGCTCCGGTTGCGGCTGAGGTGGCTCCGGTTGCGGCTGAGGTGGCTCCGGTTGTGGATGAAGTGCCCTCCAACGATGCCGTTGCAAAGGAAGCTTCTGGAGCAGAGGAGTCCAAAGATACCCTTGTTAAACCCGAGAATACAGAAGTTCCTGAAAAAAAACAAAGCTCGAGAGGATCTCTTGATAGAGATATCGCTCTGGCTGAAGTAGTGAAAGGGAAAAAGTTGTCCTATGTGAAGGCATGGGAAGAGAGTGAAAAGGCCAAAGCAGACAACAGAGCTGAAAAACATTTCTCAGCAATTGCTGCTTGGGAAAGCAAAAAGAAGGCAGCTCTTGAAGCTGAGTTGAAAAAAATAGAGGAACAATTGGAGAAAAAGAAAGCACAGCAAGCTGAAAAGATGAAAAACAAGATGGCTTTAGTTCACAAGGAAGCAGAGGAGAAGAGGGCAATAGTTGAAGCCAAGCGTGGAGAAGAGATTCTGAAGACAGAAGAAATGGCTGCAAGATACCGTGCATTAGGAACCACTCCAAAGAAGACCTTAGGCTGCTTTTAA 615 0.4699 MEEPQSKPETVPSSALVVAEEAPVAAEVAPVAAEVAPVVDEVPSNDAVAKEASGAEESKDTLVKPENTEVPEKKQSSRGSLDRDIALAEVVKGKKLSYVKAWEESEKAKADNRAEKHFSAIAAWESKKKAALEAELKKIEEQLEKKKAQQAEKMKNKMALVHKEAEEKRAIVEAKRGEEILKTEEMAARYRALGTTPKKTLGCF* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0718 204 MobiDBLite consensus disorder prediction 52 84 - -
Vra4g0718 204 Pfam Remorin, C-terminal region 96 199 IPR005516 -
Vra4g0718 204 MobiDBLite consensus disorder prediction 36 84 - -
Vra4g0718 204 Coils Coil 122 168 - -
Vra4g0718 204 PANTHER OS02G0117200 PROTEIN 32 204 - -
Vra4g0718 204 PANTHER CARBOXY-TERMINAL REGION REMORIN 32 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0718 Vra-Chr4 13560345 13562932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0718 - - pvu:PHAVU_008G067400g 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0718 4 13560345 13562932 Vra8g2247 8 40746094 40748961 ECH
Vra4g0718 4 13560345 13562932 Vra11g0295 11 2097831 2100411 ECH
Vra4g0718 4 13560345 13562932 Vra4g0718 4 13560345 13562932 ECH
Vra11g0295 11 2097831 2100411 Vra4g0718 4 13560345 13562932 ECH