Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1867 ATGCATGGTCGTTCTAAACACATTGATGTCCGATTTTACTTTCTTCGAAATCTTACCAAGACTGGATCTGTCAAGATGATAGAAAGCACCACCACAATAGTTTTCTTGCTTGCAATAGTTGCAACTGAGAAGAGGTTATCACTAATCAAGGCATGGGAAGAAAGTGAAAAATCAAAAGCTGAAAACAAGGCACATAAAAATCTTTCAGCCATTTCGGCATGGGAAAACAGCAAGAAAGCTTCAGTCGAGGCAGATCTAAAGAAAAAAGAAGAAGAATTGGAGAAGAAAAAAGCAGAATATGCAGAAAAGATAAAGAACAAAATAGCTGAAATTCACAAGGAAGCTGAAGAGAAAAGAGCAATAATTGAGGCAAAGAAAGGAGAAGAACTTCTGAAGGAGACAGCTGCAAAGTATAGAGCAACTGGAACAGCTCCAAAGAAACTCCTAGGCTGTTTCTAA 459 0.3791 MHGRSKHIDVRFYFLRNLTKTGSVKMIESTTTIVFLLAIVATEKRLSLIKAWEESEKSKAENKAHKNLSAISAWENSKKASVEADLKKKEEELEKKKAEYAEKIKNKIAEIHKEAEEKRAIIEAKKGEELLKETAAKYRATGTAPKKLLGCF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1867 152 PANTHER REMORIN 1.4 26 152 - -
Vra1g1867 152 PANTHER OS02G0117200 PROTEIN 26 152 - -
Vra1g1867 152 Coils Coil 79 121 - -
Vra1g1867 152 Pfam Remorin, C-terminal region 44 147 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1867 Vra-Chr1 35621674 35624287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1867 - - vra:106762655 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2247 8 40746094 40748961 Vra1g1867 1 35621674 35624287 PCT