Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0295 ATGGGAGAAGAGGTCTCAAACAAAACCCAACCAGAGTTGCACCATCACCATGTTGTTGTCGACTCTGTTCCTCCTCTTCAGGAAAAAGAATCAGATAAACCTGACCCTCCAAACGAGAACGTCGCTTCTCCTTCTCCACCTCCTGTTCAAAAGGTTGAAGATCATCCTACTGAAAAGGAGACGGAGGATTCAGTCAGCAAAGATGCTATGCTTGCAAGAGTTTTAACAGAGAAAAGATTGGCTTTAATCAAAGCATGGGAGGAAAGTGAAAAGACAAAGGCAGAGAACAGGGCATACAAAAAGCACTCTGCTGTTGAGTTGTGGGAGGATAGCAAGAAAGCATCAATAGAGGCAGAACTCAAGAAAATTGAGGAAAACTTGGAAAGGAAGAAGGCTGAGTATGTTGAAAAAATGAAGAATAAAGTTGCTGAAATTCACCGATTAGCTGAAGAGAAAAGGGCATACGTGGATGCACAGAAGAGTGAAGAATTCCTGGAAGTAGAGGAGACAGCTGCAAAGTTTCGTAGCCGTGGAGTTACGCCAAGGAAATTCTTTGCATGCTTTAGTGCCTAA 573 0.4311 MGEEVSNKTQPELHHHHVVVDSVPPLQEKESDKPDPPNENVASPSPPPVQKVEDHPTEKETEDSVSKDAMLARVLTEKRLALIKAWEESEKTKAENRAYKKHSAVELWEDSKKASIEAELKKIEENLERKKAEYVEKMKNKVAEIHRLAEEKRAYVDAQKSEEFLEVEETAAKFRSRGVTPRKFFACFSA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0295 190 Pfam Remorin, C-terminal region 78 182 IPR005516 -
Vra11g0295 190 PANTHER OS02G0117200 PROTEIN 1 189 - -
Vra11g0295 190 MobiDBLite consensus disorder prediction 52 67 - -
Vra11g0295 190 Coils Coil 113 151 - -
Vra11g0295 190 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 189 - -
Vra11g0295 190 MobiDBLite consensus disorder prediction 8 36 - -
Vra11g0295 190 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0295 Vra-Chr11 2097831 2100411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0295 - - gmx:100305683 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0295 11 2097831 2100411 Vra11g0295 11 2097831 2100411 ECH
Vra8g2247 8 40746094 40748961 Vra11g0295 11 2097831 2100411 ECH
Vra4g0718 4 13560345 13562932 Vra11g0295 11 2097831 2100411 ECH
Vra11g0295 11 2097831 2100411 Vra8g2247 8 40746094 40748961 ECH
Vra11g0295 11 2097831 2100411 Vra4g0718 4 13560345 13562932 ECH