Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2330 ATGCCTATGAATTGCCTTGAAGATGTTGACCAGGAGCGGTACGAGGAGGTGTTGGTGGTGCCGCCATGGACGGCCAGGAGATCAACGTCCGAAGGTGCAAGTCCGAGGAATGGGACTCTGGTGCTTGCTAAGGAGAGAACTCGCCGGCAAGATTGGTTTAACGGTTTTAACCTTTACAAAGGTGGCTGGAATATCAGCAACGCGTCTTATATAACGTCAGTTATGTCTACTGCGTTTCCTTTTTTCGTTGTGGCTGCAGTCTGGTTCGTGATTTTTGGAGCTGTTTTACTTATCGGCTGTGCTTGTTGCTGCTGTTGCAACGGAGGAGAGCCAAGCGACTATTCTAAATTTGTCCATTATTTTTCGTTGTTCTTGCTTGTCCTCAGCACCATTACCACAATAGGTGGATGCGCTCAGTTGTACTCTGGTCAGGGGAAGATTGATGGAACCACTTCCGAGACACTTGATTACGTTTTGAATCAGGCACAATTCGTGGCTGAAAACCTCAACACCATATCAAATTATTTCGATTCAGCTAAGCACGTTGTGAGGGAGCCTCCTCTGCCACTAGACATAGATCTTGGACCGGACCTTGATGACATCAAATTAAAAATAGACCGTGCTGCTGACACTCTCTCCAACAAGGTTACCGCTAATTCAAAGACCATACGCAAAGCCATAGATGTAGTAAGACTGGCTCTCGTTATTGTTGCTGTTGTTTTGTTCTTTGTTGCATTTCTCCGGCTCTGTATGTTTGAATTTGTCTTATTCTTTTCTGGACCATATGCTAAGTGTTTATCAGATTATATAGGATCTCATTTGGGTTTCGTGTGTATGCAGTCTTTTGTTTACTTGGGTGGAAGTGTCCAGTGTACTCTGTTTTCTTGTGGCTGCAGCTTGGTAGTTATTGGATGGATTCTTGTCACTTGTACCTTGGTACTTTGTGCTGCATTTATTTTTGTTCATAATATGACTGGAGATACATGTGTTGCGATGGATGAATGGGTTGTGAACCCCACCGCCCACACTGCACTGGATGACATATTTCCATGCTTGGAGAAAAAAGCTGTACTGGAAACATATTTAAGTAGCAAGATCCTCACATATAAAATCGTTGAAGCATTTGACGAAGTCATTTCCAACTTCACGAACTCAAATACTCAATCAGGCCCCCTCGTCCCTCTTCTCTGCAATCCATTTAATTCAGACCTAACAAGACGCAACTGCTCTTCAGGGGAAGTCACATTCCAAAACGCCACCCAGGTTTGGAAAAACTTTACGTGCAAGGTTTCGTCAAGTGAAAAATGTACGAGTGCAGGTCGTTTGACACAGAGCATTTACACGAAACTGGGAGATGCAGTGAATGTGACGTACGGTTTATTTGAGTATGGGCCATTTTTTGTTGACTTAGTTGACTGCAGTTTTGTTCGGAAAACGTTCAAGGACATTAGCACCCATTATTGTCCACCTCTGCGAAGATATTGTGAACAGGTTTATTTGGGATCAGTTCTGGTTTCTGCAGCAGTAATGCTCTCTTTGATATCTTCGCTCTTCTTTGTCAGAGAGCAGTGGATGTTTCTTCACAACAATGGTGTTCTTTAG 1602 0.4357 MPMNCLEDVDQERYEEVLVVPPWTARRSTSEGASPRNGTLVLAKERTRRQDWFNGFNLYKGGWNISNASYITSVMSTAFPFFVVAAVWFVIFGAVLLIGCACCCCCNGGEPSDYSKFVHYFSLFLLVLSTITTIGGCAQLYSGQGKIDGTTSETLDYVLNQAQFVAENLNTISNYFDSAKHVVREPPLPLDIDLGPDLDDIKLKIDRAADTLSNKVTANSKTIRKAIDVVRLALVIVAVVLFFVAFLRLCMFEFVLFFSGPYAKCLSDYIGSHLGFVCMQSFVYLGGSVQCTLFSCGCSLVVIGWILVTCTLVLCAAFIFVHNMTGDTCVAMDEWVVNPTAHTALDDIFPCLEKKAVLETYLSSKILTYKIVEAFDEVISNFTNSNTQSGPLVPLLCNPFNSDLTRRNCSSGEVTFQNATQVWKNFTCKVSSSEKCTSAGRLTQSIYTKLGDAVNVTYGLFEYGPFFVDLVDCSFVRKTFKDISTHYCPPLRRYCEQVYLGSVLVSAAVMLSLISSLFFVREQWMFLHNNGVL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2330 533 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 299 524 IPR040283 -
Vra7g2330 533 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 29 252 IPR040283 -
Vra7g2330 533 PANTHER TRANSMEMBRANE PROTEIN 299 524 - -
Vra7g2330 533 PANTHER TRANSMEMBRANE PROTEIN 29 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2330 Vra-Chr7 43373152 43376360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2330 - - vra:106766478 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2330 7 43373152 43376360 Vra9g0006 9 59594 63414 ECH
Vra7g2330 7 43373152 43376360 Vra5g1232 5 18694583 18698754 ECH
Vra7g2330 7 43373152 43376360 Vra7g2330 7 43373152 43376360 ECH
Vra7g2330 7 43373152 43376360 Vra5g0411 5 4285795 4290542 PCT