Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0006 ATGCTTCGTCTCGTTTCAATTCTTGTTCTTTCATGGATCTTGTTTTCTCCATGCCATGCACAAGATTCAGGGTCCCCAAAAGAAACCCAGAATGGAAACCCTGCACCTCAGAATAACTCAATAATACCATTAGCAGCATCAAGAACATACAGAATTGACCCAAGTAATGATTTCAATTACTACGATGGTGGATGGGATATTACCAATACACATTATTATATGTCTCTTGCTTTTTCTGGTGTTCCTCCGGTTGCTGTTGCTGTCGTCTGGTTTTTCATGGTGGCAATTGTCTTCACCCTCATAGCTTTATTGAGTTGTTGTGGCTGCTGCAAGGGAAAGCACAGTGCTGAAATTGGAGGGTTTTTCCTTTACACTGGACTGGAGAGATTCCAGATTACTGCAAATGATGTATCAGATGTTCTTGTCACGAAAGCAAACTCAATATTTAATATTGTTGAAAACGTGGTAACCAATCTTGCAGCCGCCAAGAACATACAAGTAGCTGGTTTTACTCTTCCAGATGATATCAAGCAAGGCATTGAAATCGCTGAAGATTTCACCAACGAAGCTGATATTATTAGGAATCAAGCAGAGAAAACTGCAAGAATCTCAATGGAATTCCTGAAAGCTATAAGCGAAAGTCTGATCATTGTTGGCTCTATGATGCTTATTTTGGCAGCAATTGGCTTCATGGTCTCTTTTCTTGGCTGGAAAGTAGTCGTTTACATCTTGGTTTTCTTTGGGTGGATTCTGGTCACAATCACATTTCTGTTGAGCAGCTTATCTTTGGTTGTTCATAATGGTGTAGCTGACACATGTGTTGCCATTGATGAATGGGTTCAACACCCACGAAGTGAATCAGCTCTAAGTAAGCTTCTTCCTTGCATGGATGAGGCAACAACCCAGAAAACCTTGGACATAAGCAAAAACACCTCGTACCTTGTGGTAAATTTGGTTAATGAATTTGTAGTTAATATAGCCAACAACGATAATCCTCCAATGGCTGATAAGGATATAAAGTACAATCAATCTGGTCCAGCCTTGCCCCTCATCTGCAATCCATTTTTCCCTAACATGACTGAAAGAAAATGTGAGACCATGGAAATAAGCTTACAGGGTGCACCTACAGCATATAAGAGTTTTTTATGCAATACATCTCCATCTGGTGTGTGCATTACAGTGGGGAGATTGACTCCATCCCTGTACTCAAAGGTTATGGTGGCTACCAACTTGAGTGACTCACTGTATCGAAATGGTCCAGTCTTTGCTGGACTATTAAACTGTTCTTTTGTCATAGGAACATTTGATCAAATCAATAACGATGATTGCCCTTCGTTCAAGCGAAACAGCCACCAGATATTCATTGGCTTGGTGGTTGTTTCAACTGCAGTAATGTTTTCTGTGATTTTGTGGGTTGTCTTTGTCAAAGAAAGACAAGTTCAAATGTCTGCAAAGAAGATAAGGACAAGAACAGCAACACCTGTTGTAGTTCCACAAGAACATGACCATGATGTAGTTCCACAAGACCAAGAAAACCATATTAGCACACCATAA 1554 0.4028 MLRLVSILVLSWILFSPCHAQDSGSPKETQNGNPAPQNNSIIPLAASRTYRIDPSNDFNYYDGGWDITNTHYYMSLAFSGVPPVAVAVVWFFMVAIVFTLIALLSCCGCCKGKHSAEIGGFFLYTGLERFQITANDVSDVLVTKANSIFNIVENVVTNLAAAKNIQVAGFTLPDDIKQGIEIAEDFTNEADIIRNQAEKTARISMEFLKAISESLIIVGSMMLILAAIGFMVSFLGWKVVVYILVFFGWILVTITFLLSSLSLVVHNGVADTCVAIDEWVQHPRSESALSKLLPCMDEATTQKTLDISKNTSYLVVNLVNEFVVNIANNDNPPMADKDIKYNQSGPALPLICNPFFPNMTERKCETMEISLQGAPTAYKSFLCNTSPSGVCITVGRLTPSLYSKVMVATNLSDSLYRNGPVFAGLLNCSFVIGTFDQINNDDCPSFKRNSHQIFIGLVVVSTAVMFSVILWVVFVKERQVQMSAKKIRTRTATPVVVPQEHDHDVVPQDQENHISTP* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0006 517 MobiDBLite consensus disorder prediction 498 517 - -
Vra9g0006 517 PANTHER TRANSMEMBRANE PROTEIN 32 490 - -
Vra9g0006 517 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 32 490 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0006 Vra-Chr9 59594 63414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0006 - - vun:114167622 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2330 7 43373152 43376360 Vra9g0006 9 59594 63414 ECH
Vra9g0006 9 59594 63414 Vra9g0006 9 59594 63414 ECH