Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0411 ATGCCATGCTTCACACCACACCCTTCACTTCTCCTCCTTCTCACCCTTCTCCTACCTTTATCGTTCTTCTCTCTCTCCGCCGCTGTTAAAACCTCTGATTTCCATTCCTTGCGTTATCCAGATGGAGTTGAGGGTGGTGGTTGGGGAGAGTTCCGGGAGGTGCTACCGTGGAAAACGAGGAGATCGATGGCCGAAGATGCTCCGAGCAACACGTCTTTGATATTGGCTCAGAGAAGAACTACGAGGAAGGACCCTTTGGACAACTTTAACCGTTACACCGGTGGTTGGAATATCAGCAATCGCCACTACATTGCTTCAGTTGTTTTCACTGCGGTTCCCTTCTTTGTTGTTGCTGCGGTCTGGTTTGTGATTTTTGGACTTAGTTTATCCATAATCTGTTTGTGCTACTGCTGTTGTCCAAGAGAGCCTTACGGTTATTCACGTCTGGCCTATGCTTTATCCTTGATCTTACTCATCCTCTTCACCGTTGCAGCAATAGTTGGATGTGTCCTTCTTTACACCTCTCAGGGGAAGTTTCACGGGAGCACCATAAACACACTGGAATATGTGGTGAGTCAGGCAGACTTCACCGCTGAAAACCTCAGGAATGTGTCAGATTATCTTGATGCAGCTAAGAAGATTGGAGTTGATGCCGTTTTTTTGCCTGCTGATGTTCAGAAGCAGATTGACGATATTAAGACTAAGATTAATTCTTCTGCTGTAGAACTTTCCAGCAAGACTAAAGATAATTCAGAGACAATTAGAGATGTCATAGATGCAATGAGACTGGCTCTGGTTATTCTTGCTGCTGTTATGCTCTTTCTTGCATTTGTTGGATTCTTATTATCAATATTTGGTCTGCAAGGTCTTGTATACTTCTTGATCCTCATTGGTTGGATTCTTGTTGCTGGCACATTTATACTTTGTGGTATATTTCTCTTTCTTCACAATGTGGTTGAAGATACATGTGTTGCCATGGATGAGTGGGTGCAGAACCCCACTGCACAGACAGCCTTGGATGAAATTCTTCCGTGTGTAGATAATGCGACTGCCCAGGAAACCTTGACACGGACCAGGGAAGTGACTCATCAGCTTGTTAAATTAGTTGACAACGTTGTTTCCAATATCACAAACAGGAATTTCCCACCTGCTGCTGGACCCTTATATTACAATCAATCAGGCCCCTTGATGCCTCCTCTTTGTAATCCATTTAATGCTGACCTCACTAATCGGTCGTGTGCACCTGGGGAAGTTCCGTTGGACAATGCTGCAGAGGTGTGGAAGAACTATACCTGTGAGGTTTCCTCGTCAGGCATTTGCCAGACGCCCGGTCGGATGACGCCGACGATTTACGGGCAAATGGAAGCTGCAGTGAATATAAGCTATGGGTTGTATCACTATGGTCCATTTTTGGTTGATCTGCAAGACTGCACTTTTGTGCGGAAAACATTCACAGACATCAGCAACGATCACTGTCCTGGCCTGCAGACAAATAGTGAATTGATTTATATTGGATTGGTTTTGGTATCTGCTGCTGTAATGCTGTCTTTGATCTTCTGGGTCATCTATGCAAGGGAGCGGCGGCACCGTGTTTATACAAAACAGTTCATTGACGGCTAA 1620 0.4506 MPCFTPHPSLLLLLTLLLPLSFFSLSAAVKTSDFHSLRYPDGVEGGGWGEFREVLPWKTRRSMAEDAPSNTSLILAQRRTTRKDPLDNFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVIFGLSLSIICLCYCCCPREPYGYSRLAYALSLILLILFTVAAIVGCVLLYTSQGKFHGSTINTLEYVVSQADFTAENLRNVSDYLDAAKKIGVDAVFLPADVQKQIDDIKTKINSSAVELSSKTKDNSETIRDVIDAMRLALVILAAVMLFLAFVGFLLSIFGLQGLVYFLILIGWILVAGTFILCGIFLFLHNVVEDTCVAMDEWVQNPTAQTALDEILPCVDNATAQETLTRTREVTHQLVKLVDNVVSNITNRNFPPAAGPLYYNQSGPLMPPLCNPFNADLTNRSCAPGEVPLDNAAEVWKNYTCEVSSSGICQTPGRMTPTIYGQMEAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDISNDHCPGLQTNSELIYIGLVLVSAAVMLSLIFWVIYARERRHRVYTKQFIDG* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0411 539 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 57 535 IPR040283 -
Vra5g0411 539 PANTHER TRANSMEMBRANE PROTEIN 57 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0411 Vra-Chr5 4285795 4290542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0411 - - gsj:114387485 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2330 7 43373152 43376360 Vra5g0411 5 4285795 4290542 PCT