Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03817 ATGGAAAATAACCTACCAATCATAACAAAGAGAGTATGGAACATGATACGTGTGGCCTTGTTCATGTTAAGAAAAGGCATATCAAAGGGAAAACTTATGATGGACCTAAACATGATGCTCAAACGCCGCAGCAAACTCGCCGGAAAAGCCATCACCAACCTCATTTTCCCTCACCACCACGGCAACTCCACCTCAAGGGACTACGAATTCAGCTGCAGCAACACACCTAATTACAAATTTCTCCTCAACAACAAGCGTCACCACCGCAACAACCACTTCTTCGCGTGTGCTCACGCTCCTCTCACGCAAGACGACGACATTGTGACCGTTAATGCAGTTAAGACTATGTTGGAAAAAATGATAAATACTCATGAGGTGATGGTGGAGGCTTCCCCGGCGCTCCCCGGATTCGGGCGGACACCTAAGGCGAGACAGTTGAGGGTGACTGACTCGCCTTTTCCGATGGACGACACTGATACGGTTGCGGAGGTTGACAAGGCGGCCGATGCTTTTATAAAGAGGTTCTACTTGCAGTTGAGGAAGCAGAATTGA 552 0.4819 MENNLPIITKRVWNMIRVALFMLRKGISKGKLMMDLNMMLKRRSKLAGKAITNLIFPHHHGNSTSRDYEFSCSNTPNYKFLLNNKRHHRNNHFFACAHAPLTQDDDIVTVNAVKTMLEKMINTHEVMVEASPALPGFGRTPKARQLRVTDSPFPMDDTDTVAEVDKAADAFIKRFYLQLRKQN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03817 183 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 183 - -
Vivi7g03817 183 Pfam Cotton fibre expressed protein 163 182 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03817 Vivi-Chr7 104093826 104094647 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03817 - - psat:127076491 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03817 7 104093826 104094647 Vivi2g07949 2 229067645 229068662 ECH
Vivi5g06290 5 169252864 169254629 Vivi7g03817 7 104093826 104094647 ECH
Vivi4g00091 4 979813 980872 Vivi7g03817 7 104093826 104094647 ECH
Vivi7g03817 7 104093826 104094647 Vivi7g03817 7 104093826 104094647 ECH
Vivi2g07949 2 229067645 229068662 Vivi7g03817 7 104093826 104094647 PCT