Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07949 ATGGAAAACAATCTACCAGTGATATCAAAGAGAGTGTGGAGTCTCGTACGTGTTGCCTTCTTCATGCTGAGAAAAGAAATATCAAAGGGTAAGATAATGATGAATTTAAACATGATATTTAGACGCAGAAGCAAGCTTGCTGTAAAAGCCATTGCCAATTTAATGTCCCATCATCCCAACCATGGTGGCTCCACCTCGAATCGCCACTCCCACGACTCACACAACCCATTCACTTCATCAAGGGAGTACGAATTCAGCTGTAGCAACACTCCCAATCACTTTTTCTCAATAGGAAAGCGACATCACAGCCACAACCACAGACGCAATGCTCAAGCACAACCTACACATGACGATGAGGTGACGACTATCAATGCAATGAAGGCAGTGTTGGAGTTGCTTAACAATGATCAATCGATTGTAGAAGTGTCTCCAGCATCCGGATTCAGATGTAGTCCAATGGTGAAGCAATTGAGGGTGACTGACTCGCCATTCCCTTTACGAGAAGATGATGAGAAGGATAATCAAGTTGACAAGGCAGCTGAAGATTTCATAAATAGGTTTTACAGTCAATTGAGAATGCAAGATTGA 588 0.4269 MENNLPVISKRVWSLVRVAFFMLRKEISKGKIMMNLNMIFRRRSKLAVKAIANLMSHHPNHGGSTSNRHSHDSHNPFTSSREYEFSCSNTPNHFFSIGKRHHSHNHRRNAQAQPTHDDEVTTINAMKAVLELLNNDQSIVEVSPASGFRCSPMVKQLRVTDSPFPLREDDEKDNQVDKAAEDFINRFYSQLRMQD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07949 195 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 194 - -
Vivi2g07949 195 Pfam Cotton fibre expressed protein 173 194 IPR008480 -
Vivi2g07949 195 MobiDBLite consensus disorder prediction 57 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07949 Vivi-Chr2 229067645 229068662 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07949 - - vvo:131648425 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03817 7 104093826 104094647 Vivi2g07949 2 229067645 229068662 ECH
Vivi5g06290 5 169252864 169254629 Vivi2g07949 2 229067645 229068662 ECH
Vivi4g00091 4 979813 980872 Vivi2g07949 2 229067645 229068662 ECH
Vivi2g07949 2 229067645 229068662 Vivi2g07949 2 229067645 229068662 ECH
Vivi2g07949 2 229067645 229068662 Vivi7g03817 7 104093826 104094647 PCT