Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03729 ATGTCTAATATTGTTATTGTTTTCGACTTTGACAAAACCATCATCGATTGCGACAGTGATAACTGGTTGATTGAAGAATTAGGCTTCACTGATTTGTTCAATCAGCTCCTTCCCACAATGCCATGGAATTCTGTCATGGACAAAATGATGATGGAGTTTCATTCACATGGTATAACCAATGAAGATATTGAAAAGGTTCTTCATAGGATTCCAATTCATCACAGAATAATACCAGCTATTAAATCAGCATATGCTTTAGGATGTGATTTGAGGATTGTGAGCGATGCGAATATGTTTTATATCGAAACTATTTTGAAGCATTTGGGAATAAAGGAATACTTTTCAGAGATTAACAGTAATCCAGGATATGTTAACCAAGAAGGAAGGGTTAGAATTTCACCTTATCATGACTTCAACAAAAATTCACATGGTTGTACTAATCCATGCCCTCCAAACATGTGCAAGGGCTTAATCATTGATAGAATTCAAAACACAGTTTGTGAAGTGGACAACAAGAGGTTCATCTACCTTGGTGATGGTGCTGGTGATTACTGTCCTATCTTGAGGTTTAGAGAAAGAGACTTTGTGATGCCAAGGAGGAATTTTCCAGTATGGGATTTGATATGCAAAGATTCTTCACTTGTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAGCTTGAACAAGTTTTGATGAAGTTGATCAACATAATTATTATGGAGGAACATGTTCAATTCACTGCATGTGATTGCAAGCTACAAACTCTATCAACTTCTGTGCTTGAATCCTTTCCGAAAGCTCTTCGAGTTCAGCCATAA 822 0.3674 MSNIVIVFDFDKTIIDCDSDNWLIEELGFTDLFNQLLPTMPWNSVMDKMMMEFHSHGITNEDIEKVLHRIPIHHRIIPAIKSAYALGCDLRIVSDANMFYIETILKHLGIKEYFSEINSNPGYVNQEGRVRISPYHDFNKNSHGCTNPCPPNMCKGLIIDRIQNTVCEVDNKRFIYLGDGAGDYCPILRFRERDFVMPRRNFPVWDLICKDSSLVKAEIHGWSDGEELEQVLMKLINIIIMEEHVQFTACDCKLQTLSTSVLESFPKALRVQP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03729 273 NCBIfam HAD-IB family phosphatase 5 188 - -
Vivi7g03729 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 244 IPR016965 GO:0016791
Vivi7g03729 273 SUPERFAMILY HAD-like 4 189 IPR036412 -
Vivi7g03729 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Vivi7g03729 273 NCBIfam MtnX-like HAD-IB family phosphatase 3 199 IPR006384 GO:0016791
Vivi7g03729 273 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Vivi7g03729 273 Gene3D - 1 189 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03729 Vivi-Chr7 103237944 103239321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03729 K13248 - gmx:100785878 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03729 7 103237944 103239321 Vivi2g08016 2 230224577 230225629 ECH
Vivi5g06175 5 167543353 167545295 Vivi7g03729 7 103237944 103239321 ECH
Vivi7g03729 7 103237944 103239321 Vivi7g03729 7 103237944 103239321 ECH
Vivi7g03729 7 103237944 103239321 Vivi2g08019 2 230284427 230286369 PCT