Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g08019 ATGGCTGGTGTCATAGTGATTTTTGACTTTGACTCAACAATAATTGAGATTGATAGTGATAATTGGGTTCTTGATCACTTTGGTTTAACTGAAAAATTCTATCAGCTTCTTCCTAACACGCTTTGGAATCCTCTCATGAACAAAATGATGAATGAACTTCATTCACAAGGAAAAACAATTGAAGAAATTATAGAAGTTGTTAAGAAAACTCCTATTCATCCTCGCATTGTACCTGCCATTGAAGCTGCTTATTCTCTTGGGTGTGAGTTGAGGATTGTGAGTGATGCAAATATTTTCTTTATAGAAACAATTTTGAAACATCATGGAGTGTTGAATTGTTTCTCAAAGATCACTGCAAACCCAAGTTATGTTAATGAAGAAGGGAGGCTCATAATTTGTCCCTACCATGATTATTTAAAATCTTCTCATGGATGTAACCTTTGTCCACCAAATATGTGCAAGGGGTTGGTGATAGAGAGGTTCCAAAGCTTACTTGATGATGAAGGAAAAAATAAGAAAATTATCTACTTAGGAGATGGAAGTGGAGACTTTTGTCCTAGTCTAAAGCTCAAAGAAAGTGATTATTTGATGCCTAGAATCAACTTTGCATTGTGTGATTTAGTATCCAAAAATTCTAATGACATAAAGGCACATGTACATGAATGGAGAGATGGGGAAGAGCTTGAGAATGTGCTGCTTCGTATCATCAAAACTAATATTGATAAAGGAAACAATGTTGTTGGTCCAAAAATTATGTCACTTGATTGCAAGATGGGGACAATTTCAACTGATGCTCTTAAACCATTTCCAGAAGCTATCTCAATTCCTCTTTAA 834 0.3501 MAGVIVIFDFDSTIIEIDSDNWVLDHFGLTEKFYQLLPNTLWNPLMNKMMNELHSQGKTIEEIIEVVKKTPIHPRIVPAIEAAYSLGCELRIVSDANIFFIETILKHHGVLNCFSKITANPSYVNEEGRLIICPYHDYLKSSHGCNLCPPNMCKGLVIERFQSLLDDEGKNKKIIYLGDGSGDFCPSLKLKESDYLMPRINFALCDLVSKNSNDIKAHVHEWRDGEELENVLLRIIKTNIDKGNNVVGPKIMSLDCKMGTISTDALKPFPEAISIPL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g08019 277 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
Vivi2g08019 277 NCBIfam HAD-IB family phosphatase 6 188 - -
Vivi2g08019 277 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Vivi2g08019 277 Pfam Putative Phosphatase 5 236 IPR016965 GO:0016791
Vivi2g08019 277 Gene3D - 3 192 IPR023214 -
Vivi2g08019 277 NCBIfam MtnX-like HAD-IB family phosphatase 4 199 IPR006384 GO:0016791
Vivi2g08019 277 SUPERFAMILY HAD-like 5 186 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g08019 Vivi-Chr2 230284427 230286369 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g08019 K13248 - gmx:100789743 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g08019 2 230284427 230286369 Vivi7g03730 7 103241869 103243062 PCT
Vivi7g03729 7 103237944 103239321 Vivi2g08019 2 230284427 230286369 PCT