Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g08016 ATGAATAATAGTAATATTGTTGTGGTTTTCGACTTTGACAAAACCATAATCGATTGTGATAGTGATGATTGGGTTGTTGATGAATTAGGTTTCTCTAATTTATTCAATCAACTCTTTCCTGCCATGCCATTGAACAATCTCATGGATAAGATGATGATGGAGCTTCATTCTAATGGAAAAACAATTGAAGACATTGTTGAAGTTTTGAAGAGAATTCCTATAAACCCTAGAATGATTCCTACCATTAAAGCAGCCCATGCTTTAGGATGTGATCTTAGGATTGTTAGTGATGCAAACACATTTTTCATAGAGACAATTCTCAAGAACTTTGGAATTAGAGAATGTTTTTCTGAGATTAACACTAATCCAGGTTATGTTGATGAAGAAGGAACATTAAGAGTTTTGCCATATCATGATCTCAACAAACTTCCTCATAGATGTAACCTCTGCCCTACAAACATGTGCAAGGGTCTAATCATAAATAGAATCCAAGATTCTTTTTCATGTGAAGAGAATAAAAGGTTTATCTATCTTGGTGATGGTAGGGGAGATTATTGTCCAAGCTTGAATCTTAAAGAAAAAGACTTTGTGATGCCAAGGAAGAATTTTCCTGTATGGGATTTGATTTGCAAAGATCCTTCTCTTGTGAAAGCTCAAATTTATGAATGGAGTGATTGGGAAGAACAAGAAAGGATATTGCATCAATTAATCAACAAAATTTCAATGGAAGAAACTTCTCAATTCATTTCTAATGAATTCAAGATCTCTCCACATGAGGCTTTACCTAAAGTTTTATCTCTTATGCTATGA 810 0.3358 MNNSNIVVVFDFDKTIIDCDSDDWVVDELGFSNLFNQLFPAMPLNNLMDKMMMELHSNGKTIEDIVEVLKRIPINPRMIPTIKAAHALGCDLRIVSDANTFFIETILKNFGIRECFSEINTNPGYVDEEGTLRVLPYHDLNKLPHRCNLCPTNMCKGLIINRIQDSFSCEENKRFIYLGDGRGDYCPSLNLKEKDFVMPRKNFPVWDLICKDPSLVKAQIYEWSDWEEQERILHQLINKISMEETSQFISNEFKISPHEALPKVLSLML 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g08016 269 NCBIfam HAD-IB family phosphatase 7 188 - -
Vivi2g08016 269 SUPERFAMILY HAD-like 6 201 IPR036412 -
Vivi2g08016 269 PIRSF PLP_phosphatas_PHOSPHO2 1 241 IPR016965 GO:0016791
Vivi2g08016 269 PANTHER PHOSPHATASE, ORPHAN 1, 2 5 245 IPR016965 GO:0016791
Vivi2g08016 269 Pfam Putative Phosphatase 6 237 IPR016965 GO:0016791
Vivi2g08016 269 NCBIfam MtnX-like HAD-IB family phosphatase 5 201 IPR006384 GO:0016791
Vivi2g08016 269 Gene3D - 1 191 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g08016 Vivi-Chr2 230224577 230225629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g08016 K13248 - gmx:100785878 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03729 7 103237944 103239321 Vivi2g08016 2 230224577 230225629 ECH
Vivi5g06175 5 167543353 167545295 Vivi2g08016 2 230224577 230225629 ECH
Vivi2g08016 2 230224577 230225629 Vivi2g08016 2 230224577 230225629 ECH
Vivi2g08016 2 230224577 230225629 Vivi7g03732 7 103249475 103253915 PCT
Vivi7g03731 7 103248121 103249344 Vivi2g08016 2 230224577 230225629 PCT