Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01793 ATGCCGACGCCGGTCAGCATAGCAAGGCAATGCTTGACGGACGAGGCGGCGCGTGCGCTAGATGAGGCGGTGGCCGTGGCGCGGCGCCGCTGCCACGCGCAGACGACGTCGCTCCACGCCGTCTCGGCTCTGCTCGCCATGCCAACCTCCGCCCTGCGCGAGGCCTGCGGCCGCGCGCGCTCGGGCGCGGGCGCCGCCAGGTTTTCCGGCGGGTACTCGCCGCGGCTGCAGTTCCGGGCGCTGGAGCTCTCCGTGGGGGTGTCGCTGGACCGGCTTCCGTCGTCCAAGGGGGGTGGCGGCGGCGGAGAGGAGGAGCCGCCGGTGTCGAACTCGCTCATGGCGGCCATCAAGCGGTCGCAGGCGAACCAGCGGCGGCAGCCGGAGAGCTTCCACGCGTTCCAGCAGAGCCAGCACGGGGGCACGGCGTCGTTTCTGAAAGTGGAGCTGAAGCACTTCGTTTTGTCAATCCTCGACGATCCAATCGTGAGTCGGGTTTTCGCGGAAGCAGGGTTTCGAAGCTGTGACATCAAACTCGCGCTGCTTCAACCGCCGCTTCCCCCGGTTCAGCACCGGTTCGCCCGGGCCCCTCCGGTTTTTCTCTGCAACCTGGAACCGGACCGTCCCGACGAAAATATTCGCAGGATCGCGGAGGTGCTGTCGAGAAAGAGCAAGCGAAACCCTTTATTGATGGGTGTTTATGCAAAGAGTGCTCTGAGAGGTTTTGTTGAGATGGTTCAAAAGGGTCGAGGGGGTTCGGTTTTGAGTTCGGAGTTGAGGGTGGTTTGTTTGGAGAGGGAGATTGGGGAATTTGTGAAAAGGGGTGGGAGTGGGGAGGAGGTGGTGGGCGTGAAGTTGAAGGACTTGGAGCAGCAATGCGAGGGCTGTTCTGGTTCTATGGTTGTTAGTTTCGGTGAGGTTGAGGTTTTTGTTGGGGAGGATGTAGATGTTGATGCTGTTAGGTTTGTTGTTTCGGGGCTAACGAGGTTGCTAAAGATTGGTGGCGAGAAGGTTTCTTTGCTGGGTGTGGCGGAAACCTCTCACGCTTATTCCAAGTTCTTGGCTTTGTTTCCAAATGTGGAAAACGAGTGGGATCTTCATTTGCTCACTGTCACTTCTGCCACTCCTTCTATGGAAGGACTCTACTCTAAGTCCAGCTTGATGGGGTCCTTTGTTCCATTTGGTGGGTTCTTTTCTACACCTGAAATCAGAAGTCCCCTGAACTCCTCCACAAATGGATCCTTTACCCGTTGTGACAAATGCACTGAAAAATGTGAACAAGAAGTTGCTGATATTCTGAAGACCAGTGAAGAAAATACAAGTTTGAATGATAAGATCTTGGGATTTCAAAACAAATGGAGTGATCTTTGTCAGCGTCTTCATCACAAAAGCTCACTGCCTCACTTTGATATTTCTCAGACAAGGCCCCAAGCTCCAATACTTGAGACTTTACGGTTTGGTCCAGGTTTTAAAGAAAGCAGCAGTAAAGATCCACCACGCAGTGAATTCCAATATTCTACTGCTCAAATGTCTTACATGCTGCCCAAAGGGTTGCATAATACTGTAACTGGTAGTGATTCAAAGGTCTCAGAGACACTGCAAATTGATGCGAAGACTCCTAGGATTGTCCCTTCGAGTGTGCTTGACCACAACAGATCATCTTTATCCCATACACCTGTGACAACAGATTTAGGATTGGGAACGTTATATACATCAACTTCACAGTATCCAGATACCCCAAAACTACAAGATCAGAAAAAGCATCTTCAGCAATTGTCAGACTCTATTTCAACTGATTGTGATGCTGTTAATGAAACTACTTCACACCAAATTCCTAGATCTTCTTGGTCTGGTTCAAATTTTGATGGGAAATTTGATTTAGCAGATTTCAAGTCTCTTAATCGCGTTCTTACTGAAAGGGTTGGCTGGCAGGATGAAGCCATACGTGCTATCAGTCAAACTTTGTCTCTTGGTAAATTTGGTTCAGGAAAGAGTAGAGGTTCACAAGGTAGAGCAGACACATGGTTGGCTTTCCTTGGACCAGATAGACTCGGCAAAAGGAAAATTGCTTCAGTTCTTGCAGAGACTATCTATGGAAACGCTGAAAGCCTAATCTATGTGGATCTGGGCTTCCAGGACAGTTTTTCCCCATTGAACTCAGTTTTTGAATACCAAAAATCACGTTGTGATGTGCTTAGGAGGAAGACAATTGTGGACTATATTGCTGGAGAGTTGAGTAAAAAACCCCATTCCGTTGTCTTTCTTGAAAACATAGATAATGCTGATTTTCTGGTGCAGACTAGTTTGTTGCAGGCAGTAAAAGCAGGCAAATTTCCAGATTCACATGGAAGGGCAATTAGCATCAATAATACAATCTTTCTTGTAGCCTCAACTAAAGGTAGTAGTAGTTCTTTGGTCTCAGATGAGTCTAAGATGTTTTCGGAGGAAAGAATCCTTGAAGCCAAAAGATGTCAAATGCAACTACTACTAGGACATGCTTCCGAGGATGCCAAAACAATTGGTACCACAAATGTCAAGGTTGTACCAAGAAAAGGTTTTTCCAAATCATCATCTCTGAACAAAAGAAAGCAGACTGATACCAGTGACTCCAACAAGGGAACAACAAGAAAGATGCAGAAACAGGACAGTGAGTCATCTCGATCCTATCTGGATCTAAACATGCCTGTAGAGGAGAATGATGAAGGTGTCAATGACAATGACAATGACCAAGAAAGTGAATCCATAACAGAAAACACAAACAACTGGTGTCAACATCCAATTTCGCACGATACTTGGTTAAGTGACCTCTTTGATCAAATTGACGAGAAAGTGGTGTTTAAGCCATTCAACTTTGAGGAGCTTGCTGAGCAAGTGTTGAAAAGCATCGGCATACTATTTCAAAGGACATTCGGATCAGAGCTTGATCTGGAAATTGATTATGAGGTAATGACACACATACTTGCAGCTGCTTGGTTATCAGACAAAAAAAATGCAGTGGAGAATTGGGTTGAACATGTTCTTGGCAGATGTTTTGTGGAAGCACAGAAGAAATACCATCCTGTGTCTCAGTATGTTGTGAGACTGGTTAACTGTGAATCCATTTTTGTGGAAGAGCAAGCTCCCGGTTTATGCCTTCCAGCTAGAATTAACTTGGACTAA 3156 0.4753 MPTPVSIARQCLTDEAARALDEAVAVARRRCHAQTTSLHAVSALLAMPTSALREACGRARSGAGAARFSGGYSPRLQFRALELSVGVSLDRLPSSKGGGGGGEEEPPVSNSLMAAIKRSQANQRRQPESFHAFQQSQHGGTASFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALLQPPLPPVQHRFARAPPVFLCNLEPDRPDENIRRIAEVLSRKSKRNPLLMGVYAKSALRGFVEMVQKGRGGSVLSSELRVVCLEREIGEFVKRGGSGEEVVGVKLKDLEQQCEGCSGSMVVSFGEVEVFVGEDVDVDAVRFVVSGLTRLLKIGGEKVSLLGVAETSHAYSKFLALFPNVENEWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPEIRSPLNSSTNGSFTRCDKCTEKCEQEVADILKTSEENTSLNDKILGFQNKWSDLCQRLHHKSSLPHFDISQTRPQAPILETLRFGPGFKESSSKDPPRSEFQYSTAQMSYMLPKGLHNTVTGSDSKVSETLQIDAKTPRIVPSSVLDHNRSSLSHTPVTTDLGLGTLYTSTSQYPDTPKLQDQKKHLQQLSDSISTDCDAVNETTSHQIPRSSWSGSNFDGKFDLADFKSLNRVLTERVGWQDEAIRAISQTLSLGKFGSGKSRGSQGRADTWLAFLGPDRLGKRKIASVLAETIYGNAESLIYVDLGFQDSFSPLNSVFEYQKSRCDVLRRKTIVDYIAGELSKKPHSVVFLENIDNADFLVQTSLLQAVKAGKFPDSHGRAISINNTIFLVASTKGSSSSLVSDESKMFSEERILEAKRCQMQLLLGHASEDAKTIGTTNVKVVPRKGFSKSSSLNKRKQTDTSDSNKGTTRKMQKQDSESSRSYLDLNMPVEENDEGVNDNDNDQESESITENTNNWCQHPISHDTWLSDLFDQIDEKVVFKPFNFEELAEQVLKSIGILFQRTFGSELDLEIDYEVMTHILAAAWLSDKKNAVENWVEHVLGRCFVEAQKKYHPVSQYVVRLVNCESIFVEEQAPGLCLPARINLD 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01793 1051 MobiDBLite consensus disorder prediction 864 883 - -
Viun8g01793 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 800 IPR027417 -
Viun8g01793 1051 Gene3D - 10 182 IPR036628 -
Viun8g01793 1051 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1019 - -
Viun8g01793 1051 ProSiteProfiles Clp repeat (R) domain profile. 8 187 IPR004176 -
Viun8g01793 1051 MobiDBLite consensus disorder prediction 850 915 - -
Viun8g01793 1051 MobiDBLite consensus disorder prediction 897 911 - -
Viun8g01793 1051 Gene3D - 605 838 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01793 Viun-Chr8 28816851 28822139 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01793 - - vun:114193089 1982.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01793 8 28816851 28822139 Viun8g01793 8 28816851 28822139 ECH
Viun8g01793 8 28816851 28822139 Viun1g03225 1 40097172 40102501 ECH
Viun6g01137 6 20739090 20744786 Viun8g01793 8 28816851 28822139 ECH
Viun1g03225 1 40097172 40102501 Viun8g01793 8 28816851 28822139 ECH
Viun7g00165 7 1176174 1180573 Viun8g01793 8 28816851 28822139 ECH
Viun6g01137 6 20739090 20744786 Viun8g01793 8 28816851 28822139 PCT