Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00131 ATGGAAATTCAGGCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCGAAGTTGGTGGCGGCGAGGAAGCTCTGGAACGTAGTACGGATCGTGTTCTTGATGTTGAGAAAAGGCATAGCCAAGAGTAAACACGCCGTTGACTTCAACTTCAACTTCAACAGAGGCAAACTCGCCGCCGCCAAAGCCATCCTCCACCTCCAGCGCCACCATCACGACGCCGTCTACCCCCACCGCGACTACGAGTTCAGCTGCAGCAACAGCCCCGCCGTCACGAAACGCGGCAAACACCGAACACGGTTCCCGCAGTACCAGTACGACGACGCTTCGAGCGTTCGGAAAGTGCTGGAGATTCTGAACAGCAATAACCAGATGGAGGGTTCTCCTCCTCCGCTGAAGAGTCCGATTGGGAAGAAGGTGAGAATCACGGACTCTCCCTTCCCTCTGAAGGAGGAGGAAGAGGACAACCAGGTTGACGTGGCGGCGGAGGAGTTCATCAAGAGGTTCTACAAAGACCTTAACTTGCAGCAGAAAATGGCTGCTATTGAATCACCCTACCATTCTAACTTCTGGGGCAGATGA 582 0.5498 MEIQASPSPSPSPSPSPKLVAARKLWNVVRIVFLMLRKGIAKSKHAVDFNFNFNRGKLAAAKAILHLQRHHHDAVYPHRDYEFSCSNSPAVTKRGKHRTRFPQYQYDDASSVRKVLEILNSNNQMEGSPPPLKSPIGKKVRITDSPFPLKEEEEDNQVDVAAEEFIKRFYKDLNLQQKMAAIESPYHSNFWGR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00131 193 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 19 184 - -
Viun4g00131 193 Pfam Cotton fibre expressed protein 155 177 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00131 Viun-Chr4 641021 641967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00131 - - vra:106768173 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00131 4 641021 641967 Viun10g02625 10 39812411 39813311 ECH
Viun4g00131 4 641021 641967 Viun5g03861 5 47065247 47066160 ECH
Viun4g00131 4 641021 641967 Viun4g00131 4 641021 641967 ECH
Viun3g00316 3 1834854 1836200 Viun4g00131 4 641021 641967 PCT