Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01476 ATGCACACAAGAACTCCTTCCTTCTCCTCTTCTCTCCTCGACGCCATTTGCCATTCCATTGACGACTCAAAATCCAATCTTCATCAGGATCAACCACCTTCTCTCTTCGATCACAATACGCACTCTTTCACCTTCCAAAAAGGTCGCAATAAAGACAGAATGAATCTTCGCCGGGCGGTCATGCTCGAAGATTGGATGGAGAAACATACTTCTCATTCCCGTTCCCAAAGTTCTCAGTTTCTGAACTCCAGTTCAAGCTCCTCAGAATGCAGCTCTGGGGGGATATTTTCCTCTTCGGAAACCGACACCACAACCTTGAAGAAACAAAGACCGAGACCCACATCTGAGAAGAAGAAACAAGACCATAGCGTTTCCGAGAAGCAGAATAAAGAGGGTGGTTTCGCAAGGACCAAGTTGCGGGCTTTGAAAATTTACGGCGAATTGAATCAGAGAGTGAAGCAACCCATTTCACCGGGGAGTAGAATCGCTAGCTTCCTTAGCTCCATCTTCAACTCCCAGAACGTGAAGAAAGCCAAAATGTGTTACGTTGGGGCTGTTGAAGATGTTAGCTTTGAACACAAATCAAAGTCCCCGTGTTTCTCTTCCACTCCTTCTTCCTTCTCGAGAAGGTCTTGCATGAGCAAAACATCCTCTTCGGCTAAAAAGTCCAACACCAATGGGGTCAAAAGATCCGTGAGGTTTTACCCCGTTAGCGTAATCCTAGGCGAGGATTCTGAACCACAACCTAGTTATCACAAATGTAGCAACATTTATGAGAGTGAGCCTAATTTCACTGTGAGGAAGTTCACCAGAAGTTCTTCGATAAAGGAGCTAAAGAACACTGTTCGGGGAGAAGAAAATGGAGCTGAAGAAGCAGCAGCGCGTGGTTTCGTAAAAGGTTATCGAAATTCTGGTAAGGGTGAGTTTAATTTTAGAGGCTTTTATGGAAATGAGGATGGCGACGACGACGACGACGACGAAGAAGAAGATGACGCGAGTTGTTCGAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAACTTCCTGTCTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCCAGTGGTCTATGTTTTTAG 1128 0.4486 MHTRTPSFSSSLLDAICHSIDDSKSNLHQDQPPSLFDHNTHSFTFQKGRNKDRMNLRRAVMLEDWMEKHTSHSRSQSSQFLNSSSSSSECSSGGIFSSSETDTTTLKKQRPRPTSEKKKQDHSVSEKQNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTSSSAKKSNTNGVKRSVRFYPVSVILGEDSEPQPSYHKCSNIYESEPNFTVRKFTRSSSIKELKNTVRGEENGAEEAAARGFVKGYRNSGKGEFNFRGFYGNEDGDDDDDDEEEDDASCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01476 375 MobiDBLite consensus disorder prediction 312 334 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 69 133 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 26 43 - -
Vimu7g01476 375 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 3 374 IPR039621 GO:0009734
Vimu7g01476 375 Coils Coil 275 295 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 72 104 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 105 133 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 24 54 - -
Vimu7g01476 375 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01476 Vimu-Chr7 13984336 13986121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01476 - - gmx:100803228 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01476 7 13984336 13986121 Vimu11g03040 11 49986510 49988320 ECH
Vimu7g01476 7 13984336 13986121 Vimu10g03107 10 41847782 41849272 ECH
Vimu7g01476 7 13984336 13986121 Vimu1g02780 1 40091562 40093119 ECH
Vimu7g01476 7 13984336 13986121 Vimu7g01476 7 13984336 13986121 ECH