Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03107 ATGTACGCCCTCGACATTTCACACACACAACACACCTTCGGCCTCCAAAACAACGCTAAAACCCCCTCCTTCTCCTCCTCTCTCCTCGACACCATCTACCGCTCCATCGACGAAGGAGAGAGCACCGCCAACGACATGAAACTCCACACCCAGACAATCATCAAGAAACAGAGCAGAATCCTCGTCCAACAAGACTTAACGGCGCCGACCATTCCCCGTTCTTGTTTAGTGCAAAAATGGAAGGGAAGCGAGAAAACGGTGAAAGCACAGATGGAGAGAAAACCAAAATCGCGTTTGCATGGTCACGATCACGACCGGGAGGTGATGTTCTTCAGTTCGACTTCGAGTTGCTCTGATTCCAGCTCTGGATTACTGTCTTCCTCCGACACTGAATCCCTGTACGGATCGAGGTCGCGAGTTTCGTGTTTTGCTCCTTCGAGACCCAAGCCATTGATGACGTCGGCGAGCAATGAAGAGCGTCTGATAAAGCCAAAATCGAGGGCGTTGAAGATGTACAACAATCTGAAGAAAGTGAAGCAACCCATCTCTCCGGGGGGGAAGCTGAGTACTTTTCTCAGCTCTCTGTTGGGGAACGCGAAGAAAGCCAAAACCTTGGACGAAGCAAAATCCAAGTCGGGACAAGAATCCACGTGTTCCTCTGCGTCCTCGTTCTCACGCTCTTGTTTGAGCAAGGCTTCGCCTTCCTCGAAAAAGTTGCGCGACGGGGTTAAGCGAACGGTGCGGTTTTACCCCGTGAGCGTGATCGTGGACGAGGATTGTCGACCATGCGGGCACAAGTGTTTGTACGAAGAAGACACCACGCGCGTAATGGCGGTGTCTATGCCAACGGCGTGGAAAATTGGACGCAACAAGAAGGAAGAAGAGGAAAAGGTTGTGGATAAGAGCAGACGCGTGGAGGAGGCGGCCAGAGAGTTTTTGAAAGAGTACCACCGAAGTCAGAAAAGGAGCAACTTGATTAATTTCAGGGATTTTCCCAATGCGGTGGAAGACGAAGACGAAGACGAAGACGATGAAGATACAGATAATGACGATGCAGCGAGTTATTCAAGTTCGGATCTTTTTGAG 1086 0.5055 MYALDISHTQHTFGLQNNAKTPSFSSSLLDTIYRSIDEGESTANDMKLHTQTIIKKQSRILVQQDLTAPTIPRSCLVQKWKGSEKTVKAQMERKPKSRLHGHDHDREVMFFSSTSSCSDSSSGLLSSSDTESLYGSRSRVSCFAPSRPKPLMTSASNEERLIKPKSRALKMYNNLKKVKQPISPGGKLSTFLSSLLGNAKKAKTLDEAKSKSGQESTCSSASSFSRSCLSKASPSSKKLRDGVKRTVRFYPVSVIVDEDCRPCGHKCLYEEDTTRVMAVSMPTAWKIGRNKKEEEEKVVDKSRRVEEAAREFLKEYHRSQKRSNLINFRDFPNAVEDEDEDEDDEDTDNDDAASYSSSDLFE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03107 362 MobiDBLite consensus disorder prediction 211 234 - -
Vimu10g03107 362 Coils Coil 291 311 - -
Vimu10g03107 362 MobiDBLite consensus disorder prediction 327 362 - -
Vimu10g03107 362 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 16 362 IPR039621 GO:0009734
Vimu10g03107 362 MobiDBLite consensus disorder prediction 204 236 - -
Vimu10g03107 362 MobiDBLite consensus disorder prediction 334 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03107 Vimu-Chr10 41847782 41849272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03107 - - vra:106761469 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03107 10 41847782 41849272 Vimu10g03107 10 41847782 41849272 ECH
Vimu10g03107 10 41847782 41849272 Vimu11g03040 11 49986510 49988320 ECH
Vimu10g03107 10 41847782 41849272 Vimu1g02780 1 40091562 40093119 ECH
Vimu7g01476 7 13984336 13986121 Vimu10g03107 10 41847782 41849272 ECH
Vimu11g03040 11 49986510 49988320 Vimu10g03107 10 41847782 41849272 ECH