Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02780 ATGTTCACTCACACTCTCTACCTTACTCCCTCCATCCTTTATAAACTCACCCTCTCATTCCACCAACAATCCTCAATCCCATCAAACAAACAAACTCTCTCTTCCTCATTTTCTTCAACAACACCGAATCACTTCCTTGATTTGAGTTGTTTTTTTCTTTCTTTCTTTTTTTTTTCACAAGTTCCTTGGTTTCAGTTATTGTATCACATCACAAACATGCACAACTTAGACAAGCCACAGATAGACGATGAAAACAAGCTACTAACCCCATCTTTCTCTACCACTCTTCTTGACCAAATCTACCGTTCCATCGATGAGGGAGAGAGAAAAAACGGCGAAACCAAGTTCTATAGACACACAACAATGAGCACCACCAAGAAACAGAGCAGTAGGGGCAATTCGAAATCCATGGATGCGGATAGAAAATATGTCGGCGCCAAAACCGACAAAAATAAAGTGCACCGCGACGAGGATGCTTTGTTCTTCAGCTCCACCTCGGTTTCCTCGGATTCCAGCTTTGGATTCTCTTCCTCCGACAACGAATCCATCTCTCGCGAATCGTGTCTCGCGCCGCGCGCCAGGCTCGTGGGCGGGAGCGCGTCGTTCCGGTCGGAGAGATACGGGATTCGCGTGTTCGAGGGTTTGTGTCGGAACTCCCACACCTCTGAGGAGCGACACGTGGCGGTTCGCGACGAGGAGATGCTGATAAAATCCAAGTCCCGGGCGTTGAAGATTTACAACAACCTTAAAAAAGTGAAACAACCGATTTCTCCTGGTGGTCGTGTCACGAGTTTCCTCAACTCGCTCTTCGCCAACACTAAGAAAACAAGCTCCCGCTCCTGCGGCGAAGTGCAGCACACTTCTCCTTCTTCTTCATCTTCATCATCATCATCATCATCCACCTCTTCCTCTTCGTACTATTCCTCCACATGCTCTTCTGCTTCCTCATTGTCCAGGTCTTGTTTGAGCAAAACCATGTCTTCAGGAAGAGAGAGGATGCGCAGTGGGGTGAAGCAAACAGTGCGATTTTACCCCGTGAGTGTGATCGTTGGTGAAGATAGTAGACCCTGTGGGCACAAACGTTTGTGTGAAGAGGAAGAAGCTTCAAGAGGGTTCTTGAGAGAGTACCGACAAAACCCGAAGAAGAACAATGATTTGGTTTTGAAGGAGTTGTCTTCGAGGAGTAAAGTTGATTACGATGATGATGATGATGATGATGCGTCGAGTTATGCAAGTTCGGATCTCTTCGAGCTTGATCATTTGGCAGTGTTTGGAAGTGAAAGGTACTGTGAGGAGCTTCCAGTGTATGAAACCACTCATGTTGGTACTAACCGCGCCATTGCTAATGGCCTCATAGTGTAA 1362 0.4677 MFTHTLYLTPSILYKLTLSFHQQSSIPSNKQTLSSSFSSTTPNHFLDLSCFFLSFFFFSQVPWFQLLYHITNMHNLDKPQIDDENKLLTPSFSTTLLDQIYRSIDEGERKNGETKFYRHTTMSTTKKQSSRGNSKSMDADRKYVGAKTDKNKVHRDEDALFFSSTSVSSDSSFGFSSSDNESISRESCLAPRARLVGGSASFRSERYGIRVFEGLCRNSHTSEERHVAVRDEEMLIKSKSRALKIYNNLKKVKQPISPGGRVTSFLNSLFANTKKTSSRSCGEVQHTSPSSSSSSSSSSSTSSSSYYSSTCSSASSLSRSCLSKTMSSGRERMRSGVKQTVRFYPVSVIVGEDSRPCGHKRLCEEEEASRGFLREYRQNPKKNNDLVLKELSSRSKVDYDDDDDDDASSYASSDLFELDHLAVFGSERYCEELPVYETTHVGTNRAIANGLIV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02780 453 MobiDBLite consensus disorder prediction 277 301 - -
Vimu1g02780 453 MobiDBLite consensus disorder prediction 112 148 - -
Vimu1g02780 453 MobiDBLite consensus disorder prediction 117 132 - -
Vimu1g02780 453 MobiDBLite consensus disorder prediction 133 148 - -
Vimu1g02780 453 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 85 453 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02780 Vimu-Chr1 40091562 40093119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02780 - - gmx:100798431 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02780 1 40091562 40093119 Vimu1g02780 1 40091562 40093119 ECH
Vimu10g03107 10 41847782 41849272 Vimu1g02780 1 40091562 40093119 ECH
Vimu7g01476 7 13984336 13986121 Vimu1g02780 1 40091562 40093119 ECH
Vimu11g03040 11 49986510 49988320 Vimu1g02780 1 40091562 40093119 ECH