Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03040 ATGGACAGGTGGGACAATAAACCATCAAGAAAACAGCACCGCACAGAAAACCCTTCTTTCTCTTCCACTCTACTTGACGTTATCTACCGTTCAATTGACGAAGATCAAACGGAGGAAAAGGAGGAGGAGCGGCTCATCTTTTACAGAGAAACCATGAGGAAGCAGAAACAGAGCAATTGTTTCAGAGAGGACAAACCTGAAGCTGAGAAACTCAACTGTCGCAGGGCCAGGAAGGTGGAGAATTGGATGGATAAGAGAACCTCGGAGAAAGTTCTAATGGGGAGAAACTCGTTGACGGAATTTGAAAGAAGAACGCGAAGCAATTCAATTTCAAACACTCTCTCCATGTATTCAAGTTCAACCTCTTCCTCTGAGTCAAGCTCTGTTGGGGGCTTCTCTTCTTCGGAGTCAGAGTCCTTCTATGGAGTGCAGAGGCCAAAGCCAATCAAAACCAGTGTTTCTGATAAAACCAAAACCAACTTTGAGGCCGCACTTCACAATCACAACTTCCGGAGCCACTCTTCTCAAACCCAAAAGCCAAAGCACGAGAATGGTTTCGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCCATTTCACCGGGTGCAAGACTTGCTAGCTTTCTCAATTCCCTCTTCACTTCAAGCGGAAATGCCAAAAAAGCAAAGGTTTCAACAGCGACAACGCCATCTACTTGTCGTCCCGTTCTGGTTCCGGTTCCAACAAATCGTACTGCCGATACTAAACCAGCAGCACAACAGCCAGGTTCTACATGTTCATCAGCATCTTCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCTTCTTCAAGATCAGGCGCCAAAAGGTCTGTGAGGTTTTGCCCTGTGAGTGTTGTAGTAGATGAAGATTGTAGGCCCTGTGGGCACAAGAATGTTTACGAGGGTGAAGAAGATTTGGCGGCTTCCAATGGAAAGAACAGAAGCGAGGAACTGAGACTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAGTTAGCAAGAGACTTGCTGAAGAATTATCAGAAAAAGAACGAAGTGGGGTTTGATGCTGTTATGCATTACGAAGATGAAGAAGAAGAAGATGACGACGATGTAGCCAGTTGTTCAAGTTCTGATCTTTTTGAGTTAGATAATCTATCAGCAATTGGGATTGAGAGGTATAGGGAAGAGTTACCTGTGTATGAAACTACCCATTTCAATACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAA 1281 0.4481 MDRWDNKPSRKQHRTENPSFSSTLLDVIYRSIDEDQTEEKEEERLIFYRETMRKQKQSNCFREDKPEAEKLNCRRARKVENWMDKRTSEKVLMGRNSLTEFERRTRSNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPIKTSVSDKTKTNFEAALHNHNFRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSSGNAKKAKVSTATTPSTCRPVLVPVPTNRTADTKPAAQQPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVVVDEDCRPCGHKNVYEGEEDLAASNGKNRSEELRLHVMQESRRVEELARDLLKNYQKKNEVGFDAVMHYEDEEEEDDDDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFNTNRAIANGFIL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03040 426 MobiDBLite consensus disorder prediction 242 289 - -
Vimu11g03040 426 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 426 IPR039621 GO:0009734
Vimu11g03040 426 MobiDBLite consensus disorder prediction 1 20 - -
Vimu11g03040 426 MobiDBLite consensus disorder prediction 255 289 - -
Vimu11g03040 426 MobiDBLite consensus disorder prediction 113 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03040 Vimu-Chr11 49986510 49988320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03040 - - gmx:100798956 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01476 7 13984336 13986121 Vimu11g03040 11 49986510 49988320 ECH
Vimu10g03107 10 41847782 41849272 Vimu11g03040 11 49986510 49988320 ECH
Vimu11g03040 11 49986510 49988320 Vimu11g03040 11 49986510 49988320 ECH
Vimu11g03040 11 49986510 49988320 Vimu10g03107 10 41847782 41849272 ECH
Vimu11g03040 11 49986510 49988320 Vimu1g02780 1 40091562 40093119 ECH