Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02708 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCCGACAACACCTGCAACCTCATCACCAATACCGCCACCACCACCAACTTAACCACAACTGCTACCTCTTCCTCCGCTGCTTCCACCTCCATCGCCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTCGGTCAATACCTCAAGAATCACCGACCCCCTCTTTCCCTCTCAAGGTGTAGCGGTGCACACGTCCTTGAATTCCTAAGGTACCTGGATCAATTTGGGAAGACGAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCAAACCCTCCAGCACCTTGTCCATGTCCTCTTAGGCAAGCTTGGGGGAGCCTTGACGCTCTGATTGGCCGTTTGCGTGCAGCTTTTGAGGAAAATGGTGGAAAGCCCGAGGCAAACCCTTTTGGAGCTCGAGCTGTGAGACTCTACCTTCGCGAGGTTCGTGATCTGCAATCCAAAGCAAGAGGAATTAGTTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAAACCATGCCACTGCCTCATCATTCTCTCCCTCCTCCAGGTGCAAGTGCAACTCATTAG 612 0.518 MDSNIQDFIDTCNSDNTCNLITNTATTTNLTTTATSSSAASTSIASSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQTMPLPHHSLPPPGASATH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02708 203 MobiDBLite consensus disorder prediction 167 203 - -
Vimu6g02708 203 PANTHER PROTEIN G1-LIKE2 31 184 IPR040222 -
Vimu6g02708 203 ProSiteProfiles ALOG domain profile. 49 176 IPR006936 -
Vimu6g02708 203 Pfam ALOG domain 43 162 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02708 Vimu-Chr6 23654656 23655588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02708 - - gmx:100527164 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02708 6 23654656 23655588 Vimu6g02708 6 23654656 23655588 ECH
Vimu6g02708 6 23654656 23655588 Vimu3g02405 3 38594665 38596522 ECH
Vimu3g02405 3 38594665 38596522 Vimu6g02708 6 23654656 23655588 ECH
Vimu6g02708 6 23654656 23655588 Vimu3g00103 3 795663 796262 PCT
Vimu3g01328 3 24005365 24006247 Vimu6g02708 6 23654656 23655588 PCT